Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02672 ATGTTCAACTTCAATAGAACCCTAATCTATCTCAAAACCGTAACACCACTATCCCCAAACCCTAATCCTCTTTTCCATCCCTACCCATCACTCTTCTCTCTTCATTTCTGCACCAACACTTCCGATTCAATCTCATTTGCAGTCTCCTACCTCATCCATAATTTCGGATTCTCCCCACAACCTGCTTCCAAACTTTGCTCCAATTACCGTCTTCAATTCAACACATCCCAAAACCCTGACTCTGTTCTCACATTCTTCAGAAACCACAATTTCTCACATTCACAACTCCGTCATATTGTTGAAAAAGCAACATGGCTACTTTCCTGCAACCCCTCCAAAAGGGTCTTACCAAAGTTTCAATTTTTACTCTCCAAAGGCGCTTCTAACTCCGACATTGTTAACCTCGTCAGTAAGAACCCTAGAGTCTTGTCTCCTAGCTTGAAGAGTCATATAGTCCCAACCTATGAATTGGTTTACAGATTCTTGCAATCTGACAAGGACACTCTTGCTTGTGTCTTTCACAATCCAAGTTTACTTATTGAACATATTTTTTCATATAATATTAGAATGTTGATTGAGAATCGAGTGTCTGACTCAAATATTGCAAGATTGCTTCGCGTCCGGAGTCGTACATTGTCAACACTTAACCTGGAGAAGTTATTGGAGGAATTACAGGGTTTGGGATTTGATCTTTCAAAAATAAAATTCAGCATAGCTTTGATTGCGAAAACATCGGTAACCAAAACCAGGTGGAAGGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGACGTCGCTGAAGCATTTAAGAAGCAACCTTATTGTATGTTAACATCCATTGATAAGATTAATTTAGTGATGAATTTTTGGGTCAATCAGCTGGGTTGGGATGCTATGGCTATTGCAAAATCGCCAGGTATTTTATTGTTAAGTTTGGAAAAAAGGATCATTCCGAGGGCCATAGTTGTGCAATTTCTTCTCGATAAAGGTTTGAGAAATATGAGTGCATGCTTAACTAGTCCATTTTTTGTGCACGAGAAGATGTTTCTTAGTAAGTTTATAAAATGTTTTGAGAATGAGTCTTCTTATCTACTAGAGTTGTATGAGAAAAAACTCAATCTTGCATACACCTCGGACACAACTTGTATGTCGTGA 1164 0.3857 MFNFNRTLIYLKTVTPLSPNPNPLFHPYPSLFSLHFCTNTSDSISFAVSYLIHNFGFSPQPASKLCSNYRLQFNTSQNPDSVLTFFRNHNFSHSQLRHIVEKATWLLSCNPSKRVLPKFQFLLSKGASNSDIVNLVSKNPRVLSPSLKSHIVPTYELVYRFLQSDKDTLACVFHNPSLLIEHIFSYNIRMLIENRVSDSNIARLLRVRSRTLSTLNLEKLLEELQGLGFDLSKIKFSIALIAKTSVTKTRWKEKVDTFKKWGWSDEDVAEAFKKQPYCMLTSIDKINLVMNFWVNQLGWDAMAIAKSPGILLLSLEKRIIPRAIVVQFLLDKGLRNMSACLTSPFFVHEKMFLSKFIKCFENESSYLLELYEKKLNLAYTSDTTCMS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02672 387 Pfam mTERF 83 221 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 Pfam mTERF 248 338 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 PANTHER CGI-12 PROTEIN-RELATED 44 361 IPR003690 GO:0003690|GO:0006355
Vivi4g02672 387 FunFam Mitochondrial transcription termination factor-like 147 364 - -
Vivi4g02672 387 Gene3D Transcription termination factor 3, mitochondrial 164 366 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02672 Vivi-Chr4 128013954 128017531 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02672 mTERF 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02672 K15031 - gmx:102663414 384.03