Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02671 ATGTTGAATAGTATCTGGCGCCATAGAACCCTTCTTTACCTCAACCCCTCAACTTTCTCATCATCCCTAAACCCTAATCCTCTTCTCCACCACCTCCGATCATCATTTTCTCTTCATTTCTGCACCAACACTTCTGATTCAACCTCATTTGCTGCCTCCTACCTCACCCACAATTTCGGTTTCTCCCCACAATTTGCTTCCAAACTCTGCTCCTCCCACCGTCTTCGATTCAAAACCTCCCAAAATCCTGACTCTGTTCTCAACTTCTTCAAAAACTACGGTTTCTCAGACTCCCAACTTCACAATATGATTGCCAAGGAACCTGGCCTACTTTCCTGCAACCCCTCCAAAAGGATCTTACCAAAGTTTCAATTTTTACTCTCCAAAGGTTCTTCTAACTCCGACATTGTTAACCTTATCAGTAAGAACCCTAGACTCTTGTCTCCGAGTTTGGAGAATCGTATAGTCCCATCCTATGAATTGGTTTATAGATTCTTCCAATCTGACAAGGACACTCTTGCTTGTGTATTTCACTATCCAAATATACTCACTGAGCATATTGTGGCACATAACATCACAATGCTTATTGAGAATCGAGTGTCCGACTCAAATATTGTAAGATTGCTTCGCGCCCGGAGTCATACATTGCAGATACTTAACATGATGATGTTATTGGAGGAATTACAAGATTTGGGATTTGATCCTTCAAAAATAAAATTCAGCATAGCTTTGATTGCGAAAACTTCAGTAACCAAAACCAGGTGGAATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTCATTGAAGCATTTAAAAAGCAACCTCATTGTATGTTAACATCCATTCATAAGATTAATTTAGTGATGAATTTTTGGGTCAATCAGCTGGGTTGGGATGCTATGGCTATTGCGAAAATACCAGATATTTTATCATTAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCTGTTGTGCAATTTCTTCTCGATAAAGGTTTGAGAAATAAGAGTGCAAGCTTAACTAGTCCATTTTTTATGCACGAGAAGATGTTTCTTCGTAAGTTTATAAAATGTTTTGAGAATGAGTCTTCTTATCTACTAGAGTTGTATGAGAAAAAACTCAATCTTGCATACACCTCGGACACAACTTGTATGTCGTGA 1176 0.3903 MLNSIWRHRTLLYLNPSTFSSSLNPNPLLHHLRSSFSLHFCTNTSDSTSFAASYLTHNFGFSPQFASKLCSSHRLRFKTSQNPDSVLNFFKNYGFSDSQLHNMIAKEPGLLSCNPSKRILPKFQFLLSKGSSNSDIVNLISKNPRLLSPSLENRIVPSYELVYRFFQSDKDTLACVFHYPNILTEHIVAHNITMLIENRVSDSNIVRLLRARSHTLQILNMMMLLEELQDLGFDPSKIKFSIALIAKTSVTKTRWNEKVDTFKKWGWSDEDVIEAFKKQPHCMLTSIHKINLVMNFWVNQLGWDAMAIAKIPDILSLSLEKRIIPRAAVVQFLLDKGLRNKSASLTSPFFMHEKMFLRKFIKCFENESSYLLELYEKKLNLAYTSDTTCMS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02671 391 Gene3D Transcription termination factor 3, mitochondrial 168 370 IPR038538 -
Vivi4g02671 391 FunFam Mitochondrial transcription termination factor-like 151 368 - -
Vivi4g02671 391 Pfam mTERF 87 233 IPR003690 GO:0003690|GO:0006355
Vivi4g02671 391 Pfam mTERF 252 356 IPR003690 GO:0003690|GO:0006355
Vivi4g02671 391 PANTHER CGI-12 PROTEIN-RELATED 47 365 IPR003690 GO:0003690|GO:0006355
Vivi4g02671 391 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Vivi4g02671 391 SMART mt_12 137 173 IPR003690 GO:0003690|GO:0006355
Vivi4g02671 391 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Vivi4g02671 391 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02671 Vivi-Chr4 128024406 128027807 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02671 mTERF 2.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02671 K15031 - gmx:102663414 380.178