Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02666 ATGTTGAAAACTCATCGCCATAAACCCCTTCTCTACCTCAAGGCCTTAACTTTCACACTATCCCCAAAAAACCCATTACCATTTTCTCTCCATTTCTGCACCAACACTTCCAATTCAACCTCATTTGCAGTGTCCTACCTCATCCACAATTTGGGTTTCTCTCCACAATTTGCTTCCAAACTTTCCTCCACCTACCATCTTTATTTCAACACATCCCAAAACCCTGATTTAGTTCTCAACTTCTTCAAAAACCACGGTTTCTCACACTCCCAACTTTGCCACATCATTACCAAGCTACCTTGCCTACTTTCCTGCAACCCCTCCAAAAGGGTCTTGCCAAAGTTTCGATTTTTACTCTCCAAAGGTGCTTCTAACTCCGACATTGTTAACCTTGTCAGCAAGGGCCCTGTGATCCTGTCTCCAAGCCTGGAGAATCATATAGTACCAGTCTATGAATTGCTTTACAGATTCTTGCAATCAGACAAGGATACTATTGCTTGTGCAGTTCAAAATCCAACTATACTTAGCGACCATCGCGTGCCGCAGAACATTCAAATGTTGATCGAGAATGGATTGATAGACTTAAACATTGCAAGATTGCTTAGGATGCATAGCAAGATTCTCAGCACATCTGGCATTCTCAAGGTGGTGGAGGAAGTGAAGGATCTGGGGTTTGATCCTTCACGTTCCTTATTCGCAGTAGCGATGCTTGCCAAAAGGACAGTATCCGAGACCAAGTGGAAAGAGAAAGTTGATACCTTTAAAAGATGGGGTTGGTCTGACGAAGATGTTGTTGAAGCGTTTAGAAAGCATCCTCATTGTATGTTAACATCCATTGATAAAATTAATTTAGTCATGAGCTTTTGGGTCGACGAGTTGGGTTGGGATGCTATGGCCATTGCCAAATTACCAAGGGTTTTGGGGGCCAGTCTTGAGAGAAAAATCATACCAAGGGCATATGTTGTGCAATATCTTTTGAAGAAAGGTTTGCATAAGAAAGCAAGCTTAACTACTCCATTGGTAGTTAGCGATAAGTTGTTCCTTAACAGATATATAAAACATTATAAGGAGGAGTCATCTTCTCTATTAAAGCTTTATGAACAAAAACTGAATCTCGCACATGCCACAGACAAAATTAACATGTCATGA 1149 0.4117 MLKTHRHKPLLYLKALTFTLSPKNPLPFSLHFCTNTSNSTSFAVSYLIHNLGFSPQFASKLSSTYHLYFNTSQNPDLVLNFFKNHGFSHSQLCHIITKLPCLLSCNPSKRVLPKFRFLLSKGASNSDIVNLVSKGPVILSPSLENHIVPVYELLYRFLQSDKDTIACAVQNPTILSDHRVPQNIQMLIENGLIDLNIARLLRMHSKILSTSGILKVVEEVKDLGFDPSRSLFAVAMLAKRTVSETKWKEKVDTFKRWGWSDEDVVEAFRKHPHCMLTSIDKINLVMSFWVDELGWDAMAIAKLPRVLGASLERKIIPRAYVVQYLLKKGLHKKASLTTPLVVSDKLFLNRYIKHYKEESSSLLKLYEQKLNLAHATDKINMS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02666 382 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 SMART mt_12 198 226 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 SMART mt_12 228 260 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 FunFam Mitochondrial transcription termination factor-like 143 359 - -
Vivi4g02666 382 Pfam mTERF 242 348 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 Pfam mTERF 79 226 IPR003690 GO:0003690|GO:0006355
Vivi4g02666 382 Gene3D Transcription termination factor 3, mitochondrial 138 365 IPR038538 -
Vivi4g02666 382 PANTHER CGI-12 PROTEIN-RELATED 39 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02666 Vivi-Chr4 127971491 127975647 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02666 mTERF 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02666 K15031 - gmx:102663414 403.29