Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02663 ATGGCAGCAGACATTGGGAACAGGTCTCTTACTTTATGGAGTGTTATTGTGTGTTGGAACCCTGTGGTACTTGCTGCAAGCTTGGAAAAGCAAATAGTCCCGGCTTATGAATTGGTTTATAGATTCTTCCAATCCGACAAAGATACTTTTACTTTGTTGAATTTCAATCCGACTTTCTTTGGAGAAAGCCGTGTGGTTCATAACATCAAAGTGCTGGTTGAGAATGGAGTAACAGACTCGAATATTGCAAGATTGCTTCGGAGCCAGTTTAAGATATTCCACATAAGACACATAACGGTGTTGGTGGAGGAATTAAAGCATTTGGGGTTTCATCCTTCAACGTCAATTTTCACAATAGCATTGATTGCAAAAACATCTGTACCCAAAATCCGGTGGAAAGCGAAAGTTGATGCCTTTAAGAAGTGGGGTTGGTCTGATGAAAATGTTGTCGAAGCATTTAGAAATCAACCTCATTGTATGTTAACATCTGTTGATAAGATTAATTTAGTGATGAGCTTTTGGGTTAATCAGTTGGGTTGGGATGTTCTTGCCCTCGCCAAAGTACCAAGGGTTTTTGGGGCAAGTCTGGAGAGAAGGATCATACCAAGAGGCTCAGTTGTGCATTATCTTTGGAAGAATGGTTTGCTAAAAAGGAATGCAAGTTTATCTTCTCCATTTGTGATTAACGAAAAGAAGTTCCTTGAAATATATATAAATCCGTTTAAGGAGGAGGCTTCTGATCTATTAAAGCTTTACCAAGAAAAACTGAATCTTGCACAGAACAAGGACAAATTTTCAGAGTGGCTTCTAGCAGCGGTTGCATTTGTAGTTAGTGGTTACTTCACAAATACCGGAAGTGCAAATAGTTGTGAACATATGCATTTGAAATTATGGTAG 897 0.3891 MAADIGNRSLTLWSVIVCWNPVVLAASLEKQIVPAYELVYRFFQSDKDTFTLLNFNPTFFGESRVVHNIKVLVENGVTDSNIARLLRSQFKIFHIRHITVLVEELKHLGFHPSTSIFTIALIAKTSVPKIRWKAKVDAFKKWGWSDENVVEAFRNQPHCMLTSVDKINLVMSFWVNQLGWDVLALAKVPRVFGASLERRIIPRGSVVHYLWKNGLLKRNASLSSPFVINEKKFLEIYINPFKEEASDLLKLYQEKLNLAQNKDKFSEWLLAAVAFVVSGYFTNTGSANSCEHMHLKLW 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02663 298 PANTHER CGI-12 PROTEIN-RELATED 11 244 IPR003690 GO:0003690|GO:0006355
Vivi4g02663 298 Pfam mTERF 133 234 IPR003690 GO:0003690|GO:0006355
Vivi4g02663 298 FunFam Mitochondrial transcription termination factor-like 28 245 - -
Vivi4g02663 298 SMART mt_12 50 78 IPR003690 GO:0003690|GO:0006355
Vivi4g02663 298 SMART mt_12 182 216 IPR003690 GO:0003690|GO:0006355
Vivi4g02663 298 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Vivi4g02663 298 Gene3D Transcription termination factor 3, mitochondrial 9 251 IPR038538 -
Vivi4g02663 298 Coils Coil 242 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02663 Vivi-Chr4 127946551 127949481 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02663 mTERF 6.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02663 K15031 - gmx:102663414 245.743