Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02660 ATGTTGAAGTTCAACACATGGCCCAAAAAAACCCTAATTTATCTCAAATGCTTAACTTTCCCACAAGCATCACCATTTTCTCGGCATTCTTGTACCACCACTTCCGATTCAACCTCATTCGAAGTCTCCTACCTCATCCACAATTTCAATTTCTCCCAAAAATCCGCTTCCAAACTCTGCTCCACGTACCGTCTCGGTTTCAAAACCACCCAAAAACCTGACTCTGTTCTCAACTTCTTTGCAAACTTCGGTTTCTCTAATTCCCAGTTATGCAACATGATTGCCAAGGCACCGTGGTTACTCTCCTGCAACCTCTCCAAAAGGGTGTTGCCAAAGTTCGAATTTTTCCTCTCCAAAGGTGCTTCTGACTCCGACATTGTTAGCCTTATCAGTAAAAACCCTAGACTCTTGTGTCGAAGCTTGGAGAATCATACATCCCCAACCTATGAATTGGTTTATAGATTCTTGCAATCTCACAAGGACGCTATTGCCTGTGCAGTTCACAATCCGTCTTTCTTTGAAGACAGCCGTGTGCCACAAAACATCAAATTGCTCATTGATAATGGAGTGGCTGACTCGAATATTGCGAGATTGCTTCGAATCAGGAACCGGACATTGCAGGTGCGTGACATGGTGAGTTTATTGAAGGAGTTACAGGATTTGGGGTTTAATCCTTCGAAAACTACTTTTGGTGTAGCAATGATCGCGAAAACATCAGTAACCAAAACCAGGTGGAAGGAGAAAGTTGATACCTTTAAGAAGTGGGGTTGGTCTGATGAAGATGTTATTGAAGCATTTAAAAAGCAACCTTATTGTATGTTAACATCCATTCATAAGATTAACTTAGTGATGGATTTTTGGGTTAACCAGTTGAGCTGGGACGCTCTGGCCCTTGCCAAACATCCGTCGATTCTCTCCTTAAGTTTGGAAAAAAGGATCACTCCTAGGGCCTCTGTTGTGCAATTTCTTCTGAATAATGGTTTGAGAAGAAAGAACGCAAGCTTAACTTCTCCATTTCTTGTGCCCGAGGAGATGTTTCTTGATAGGTTTATAAAAGATTTTAAGGAGTCGTCTTATCTATTGAAGTTGTACGAGGAGAAACTCAAGCTTGCATGCACTAGGGACAAAACTTGCATGTCATGA 1143 0.4182 MLKFNTWPKKTLIYLKCLTFPQASPFSRHSCTTTSDSTSFEVSYLIHNFNFSQKSASKLCSTYRLGFKTTQKPDSVLNFFANFGFSNSQLCNMIAKAPWLLSCNLSKRVLPKFEFFLSKGASDSDIVSLISKNPRLLCRSLENHTSPTYELVYRFLQSHKDAIACAVHNPSFFEDSRVPQNIKLLIDNGVADSNIARLLRIRNRTLQVRDMVSLLKELQDLGFNPSKTTFGVAMIAKTSVTKTRWKEKVDTFKKWGWSDEDVIEAFKKQPYCMLTSIHKINLVMDFWVNQLSWDALALAKHPSILSLSLEKRITPRASVVQFLLNNGLRRKNASLTSPFLVPEEMFLDRFIKDFKESSYLLKLYEEKLKLACTRDKTCMS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02660 380 Gene3D Transcription termination factor 3, mitochondrial 150 358 IPR038538 -
Vivi4g02660 380 FunFam Mitochondrial transcription termination factor-like 141 358 - -
Vivi4g02660 380 Pfam mTERF 242 346 IPR003690 GO:0003690|GO:0006355
Vivi4g02660 380 Pfam mTERF 77 206 IPR003690 GO:0003690|GO:0006355
Vivi4g02660 380 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Vivi4g02660 380 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Vivi4g02660 380 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Vivi4g02660 380 SMART mt_12 295 329 IPR003690 GO:0003690|GO:0006355
Vivi4g02660 380 PANTHER CGI-12 PROTEIN-RELATED 37 353 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02660 Vivi-Chr4 127871987 127875039 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02660 mTERF 6.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02660 K15031 - gmx:102663414 370.548