Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02659 ATGATTGCCAAGGTACCTGGCTTACTTTCCTGCAACCCCTCCAAAAGGGTCTTACCAAAGTTCCAATTTTTACTCTCCAAAGGTGCTTCTAACTCCGACATTGTTAACCTTGCCAGTAAGAACCCTAGAGTCTTGTCTCGTAGCTTGAAGAATCATATAGTCCCAACTTATGAATTGATTTATAGATTCTTGCAATCAGACAAGGAAGTTATTGCTTCTGCAATTCAGAGTCCAAATTTACTCTGTGAACAATTTGTACCGCGTAACATCTCGATGCTGATTGAGAATGGAGTGTCGAACTCTAACATTGCTAGATTGCTTCGGATTCGGAGTCAGATATTCAAGGTTCAAGACATGCTCAAGTTTGTTGAGGAAGTGAAGAATTTGGGGTTTAATCCTTCGAAAATAATCTTCTCAATAGCATTGGTTGCAAAAATGACGGTAAGCAAAAACTTGTGGGAGGAAAAAGTTGAAACCTTAAAGAAGTGGGGTTGGTCGGATGAAGATGCTCTTGAAGCATTTAAAAAGAAACCTTATTGTATGTTAACATCTGTTGATAAAATAAATTTAGTGATGAGCTTTTGGGTGAATCAGTTCGGTTGGGATGCTATGGCCATTACGAAAGCACCATTTATTTTATCGTCAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCTGTTGTGCAATATCTTCTCGATAAAGGTTTGAGAAATAAGAGTGCAAGCTTAACATGTCCATTTGTAGTGTCTGAGAAGACGTTTCTGGATAAGTTTATAAAACGTTTTAAGAAAGAGTCTTCTTATCTATTAAAGTTGTATGAGGAAAAACTCAATCCTGCGCATACTAGGGATGATAAGACGTGCATGCCGTAA 873 0.3826 MIAKVPGLLSCNPSKRVLPKFQFLLSKGASNSDIVNLASKNPRVLSRSLKNHIVPTYELIYRFLQSDKEVIASAIQSPNLLCEQFVPRNISMLIENGVSNSNIARLLRIRSQIFKVQDMLKFVEEVKNLGFNPSKIIFSIALVAKMTVSKNLWEEKVETLKKWGWSDEDALEAFKKKPYCMLTSVDKINLVMSFWVNQFGWDAMAITKAPFILSSSLEKRIIPRAAVVQYLLDKGLRNKSASLTCPFVVSEKTFLDKFIKRFKKESSYLLKLYEEKLNPAHTRDDKTCMP 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02659 290 SMART mt_12 1 30 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 SMART mt_12 203 237 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 SMART mt_12 35 66 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 Pfam mTERF 146 254 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 Pfam mTERF 2 133 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 PANTHER CGI-12 PROTEIN-RELATED 2 263 IPR003690 GO:0003690|GO:0006355
Vivi4g02659 290 Gene3D Transcription termination factor 3, mitochondrial 66 267 IPR038538 -
Vivi4g02659 290 FunFam Mitochondrial transcription termination factor-like 49 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02659 Vivi-Chr4 127867652 127870843 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02659 mTERF 2.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02659 K15031 - gmx:102663414 308.916