Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02658 ATGTTCAACTTCAATAGAACCCTAATATACCTCAAAACCTTAACACCATTATCTCCAAACCCTTATCCTGTTTTCCATCCCTACCCATCACTCTTTTCTCTTCATTTCTGCACCAACACTTCCGATTCAACCTCATTTGCTGCCTCCTACCTCATCCACAATTTCGGTTTCTCCGCACAATCTGCTTCCAAACTTTGCTCCTCCCACCGTCTTCGATTCAAAACCTCCCAAAAACCTGACTCTGTTCTCAACTTCTTCAAAAACCACGGTTTCTCAGACTCCCAACTTCACAGCATGATTGCAAAGGCACCCGGCTTACTTTCCTGCAACCCCTCCAAAAGGATCTTACCAAAGTTTCAATTTTTACTCTCCAAAGCTGCTTCTAACTCCGACATTGTTAACCTTGTCAGTAAGAACCCTAGAGTCTTGTCTCCTAGCTTGAAGAATCATATAGTCCCAACCTATGAATTGATTTATAGATTCTTGCAATCAGACAAGGACGTTATTGCTTCTACAATTCAGAATACAGACTTACTCTGTGCTCATCGTGTGCGACGGAACATCACAATGCTGATTGAGAATGGAGTGTCGGACTCGAATATTGCAAGATTGCTCAGGATTCGGAGTTGGATATTAAGCGCACGCGACATGCTGAAGTTTGTGGAGGAAGTGAAGAATTTGGGGTTTAATCCTTCGAAAATAAACTTCTCGATAGCATTGATTGCCAAAACATCGGTAAGCAAAAACTTGTGGGAGGAAAAAGTTGAAACCTTTAAGAAGTGGGGTTGGTCGGATGAAGAAGCTCTTGAAGCATTTAGAAAGAAACCTTATTGTATGTTAACATCTGTTGATAAAATAAATTTAGTGATGAGCTTTTGGGTGAATCAGTTGGGTTGGGATGCTGTGGCCATTGCGAAAACACCATATATTTTATCGTTAAGTTTGGAAAAAAGGATCATTCCGAGGGCAGCTGTTGTGCAATATCTTCTCGGTAAAGGTTTGACGAAAAAGAGTGCAAGCTTAACTAGTCCATTTGTAGTGTCCGAGAAGATGTTTCTGGATAAGTTTGTAAAACGTTTTAAGAAAGAGTCTTCTTATCTATTAAAGTTGTATGAGGAAAAACTCAATCCGGTGTACACTAGGGATGATAAGACATGCATGCCCTAA 1167 0.4053 MFNFNRTLIYLKTLTPLSPNPYPVFHPYPSLFSLHFCTNTSDSTSFAASYLIHNFGFSAQSASKLCSSHRLRFKTSQKPDSVLNFFKNHGFSDSQLHSMIAKAPGLLSCNPSKRILPKFQFLLSKAASNSDIVNLVSKNPRVLSPSLKNHIVPTYELIYRFLQSDKDVIASTIQNTDLLCAHRVRRNITMLIENGVSDSNIARLLRIRSWILSARDMLKFVEEVKNLGFNPSKINFSIALIAKTSVSKNLWEEKVETFKKWGWSDEEALEAFRKKPYCMLTSVDKINLVMSFWVNQLGWDAVAIAKTPYILSLSLEKRIIPRAAVVQYLLGKGLTKKSASLTSPFVVSEKMFLDKFVKRFKKESSYLLKLYEEKLNPVYTRDDKTCMP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02658 388 PANTHER CGI-12 PROTEIN-RELATED 43 361 IPR003690 GO:0003690|GO:0006355
Vivi4g02658 388 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Vivi4g02658 388 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Vivi4g02658 388 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Vivi4g02658 388 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Vivi4g02658 388 FunFam Mitochondrial transcription termination factor-like 147 364 - -
Vivi4g02658 388 Gene3D Transcription termination factor 3, mitochondrial 164 366 IPR038538 -
Vivi4g02658 388 Pfam mTERF 246 352 IPR003690 GO:0003690|GO:0006355
Vivi4g02658 388 Pfam mTERF 83 230 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02658 Vivi-Chr4 127865349 127866515 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02658 mTERF 4.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02658 K15031 - gmx:102663414 408.683