Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02656 ATGAGACGAGGGAGTACTTTTTATATTTTTTTTAACTTAGAAAGTTTATTCAAGTACCAATTATTCATCTCCGCCTCGTCGAAACGGCGAACAACCATGTATTCTGTTGCACTTCTGCCCTGCCGCACCGCCGCCGTGAAGCCACCCAACCACGAAGTCGCTATTTGGCCCTCTGCAACCGGAAAGAATAGATTCAAGGTAACCAAAAATTGTATTCATGTTCAATATTTGAATCCATTTTCTAGCAACAGTATTCCCTTTCTAACAACAATGTTCAACTTCAATAGATTAACTTCACTATCCCTAAACCCTAATCCTCTTCTCCACCGCTACCCGTCACTATTTTCCCTTCATTTCTCCACCAACACTTCCGATTCAACCTCATCCACCGTCTCAGATTCAAAACCTGACTCTGTTCTCAACTTCTTCAAAAACCACGGTTTCTCAGACTCCCAACTTCACAGCATGATTGCAAAGGCACCTGGCCTACTTTCCTGCAACCCCTCCAAAAGGATCTTACCAAAGTTTCAATTTTTACTCTCCAAAGGCGCTTCCAACTCCGACATTGTTAACCTTGTCAGTAAGAACCCTAAAGTCTTGCTTCCTAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGATTTTTAGATTCTTGCAATCAGACAAGGACGTTATTGCTTCTGCAATTCAGAATCCAGCTTTACTCTGTGATCATCGTGTACCGCGTAACATTGCAATGCTGATTGAGAATGGAGTGTCGGACTCTAACATTGCTAGAATGCTTCGGATTCGGAGTCGGATATTTAGGGCGCGCGACACGCTGAAGTTTGTGGAGGAAGTGAAGAATTTGGGGTTTAATCCTTCGAAAACAATCTTCTCGATAGCATTGATTGCAAAAATATCGGTAAGCAAAAACTTGTGGGAGGAAAAAGTTGAGGTGTTTAAGAAGTGGGGTTGGTCGGATGAAGATGCTCTTGAAGCATTTAGAAAGAAACCTTATTGTATGTTAGCATCGGTTGATAAAATAAATGTAATGATGAGCTTTTTTGTGAATCAGTTGGGTTGGGATGCTACGGTCATTGCGAAAACACCATATATTTTATCGTTAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCTGTTGTGCAATTTCTTCACGGTAAAGGTTTGAGAAATAAGAGTGCAAGCTTAACTAGTCCATTTGTAGTGTCCGAGAAGATGTTTTTGGATAAGTTTATAAAATGTTTTAAGAAAGAGTCTTCTTATCTATTAAAGTTGTATGAGGAAAAACTCATCAATCCTGCCTACACTGGGGATGATAAGACATGCATGCCGTAA 1341 0.4057 MRRGSTFYIFFNLESLFKYQLFISASSKRRTTMYSVALLPCRTAAVKPPNHEVAIWPSATGKNRFKVTKNCIHVQYLNPFSSNSIPFLTTMFNFNRLTSLSLNPNPLLHRYPSLFSLHFSTNTSDSTSSTVSDSKPDSVLNFFKNHGFSDSQLHSMIAKAPGLLSCNPSKRILPKFQFLLSKGASNSDIVNLVSKNPKVLLPSLENHIVPTYELIFRFLQSDKDVIASAIQNPALLCDHRVPRNIAMLIENGVSDSNIARMLRIRSRIFRARDTLKFVEEVKNLGFNPSKTIFSIALIAKISVSKNLWEEKVEVFKKWGWSDEDALEAFRKKPYCMLASVDKINVMMSFFVNQLGWDATVIAKTPYILSLSLEKRIIPRAAVVQFLHGKGLRNKSASLTSPFVVSEKMFLDKFIKCFKKESSYLLKLYEEKLINPAYTGDDKTCMP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02656 446 PANTHER CGI-12 PROTEIN-RELATED 115 418 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 Gene3D Transcription termination factor 3, mitochondrial 221 426 IPR038538 -
Vivi4g02656 446 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 SMART mt_12 105 149 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 SMART mt_12 190 226 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 SMART mt_12 326 357 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 SMART mt_12 358 392 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 FunFam Mitochondrial transcription termination factor-like 204 421 - -
Vivi4g02656 446 Pfam mTERF 301 409 IPR003690 GO:0003690|GO:0006355
Vivi4g02656 446 Pfam mTERF 140 284 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02656 Vivi-Chr4 127817968 127819579 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02656 mTERF 8.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02656 K15031 - gmx:102663414 342.813