Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02652 ATGTATTCTGTTGCACTTCTGCCCTGCCGCACCGCCGCTGTGAAGCCACCCAATCACGAAGTCGCTATTTGGCCCTCTGCAACCGGAAAGAATAGATTCAAGGTAACGGAAAATTGTATTCATATTCAATATTTGAATCCATTTTCTAACAACAGTGTTCCCTTTCTAACAACAATGTTCAACTTCAATAGATTAACTCCACTATCTCCAAACCCTAATCCTCTTCTCCACCGCTACCCATCACTATTTTCCCTTCATTTCTCCACCAACACTTCCGATTCAACCTCATCCACCGTCTCAGATTCAAAACCTGACTCTGTTCTCAACTTCTTCAAAAACCACGGTTTCTCAGACTCCCAACTTCACAGCATGATTGCCAGGGTACCTGGCCTACTTTCCTACAACCCCTCCAAAAGGATCTTACCAAAGTTTCAATTTTTACTCTCCAAAGGGGCTTCTAACTCCGACATTGTTAACCTTGTCAGTAAGAACCCTAGAGTCTTGTCTCCTAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGATTTATAGATTCTTGCAATCAGACAAGAACGTTATTGCTTCTGCAATTCAGAGTCCAGTTTTACTCTTTGATCATCGTGTACCGCGTAACATTGCAATGCTGATTGAGAATGGAGTGTCGGACTCTAACATTGCTAGAATGCTTCGGATTTGGAGTCGGATATTTAGTGAGCGCGACACGCTGAAGTTTGTGGAGGAAGTGAAGAATTTGGGGTTTAATCCTTCGAAAACAGTCTTCTCGATAGCATTGATTGCAAAAACATCGGTAAGCAAAAACTTGTGGGAGGAAAAAGTTGAGGTGTTTAAGAAGTGGGGTTGGTCGGATGAAGATGCTCTTGAAGCATTTAGAAAGAACCCTTATTGTATGTTAACATCTGTTGATAAAATAAATTTAGTGATGAGCTTTTGGGTGAATCAGCTCGGTTGGGGTGCTATGGCCCTTACGAAAGCACCATATATTTTATCGTCAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCTGTTGTGCAATATCTTCTCGATAAAGGTTTGAGAAATAAGAGTGCAAGCTTAACTAGTCCATTTGTAGTGTCCGAGAAGATGTTTTTGGATAAGTTTATAAAACGTTTTAAGAAAGAGTCTTCTTATCTATTAAAGTTGTATGAGGAAAAACTCATCAATCCTGCCTACACTAGGAATGATAAGACATGCATGCCGTAA 1245 0.4072 MYSVALLPCRTAAVKPPNHEVAIWPSATGKNRFKVTENCIHIQYLNPFSNNSVPFLTTMFNFNRLTPLSPNPNPLLHRYPSLFSLHFSTNTSDSTSSTVSDSKPDSVLNFFKNHGFSDSQLHSMIARVPGLLSYNPSKRILPKFQFLLSKGASNSDIVNLVSKNPRVLSPSLENHIVPTYELIYRFLQSDKNVIASAIQSPVLLFDHRVPRNIAMLIENGVSDSNIARMLRIWSRIFSERDTLKFVEEVKNLGFNPSKTVFSIALIAKTSVSKNLWEEKVEVFKKWGWSDEDALEAFRKNPYCMLTSVDKINLVMSFWVNQLGWGAMALTKAPYILSSSLEKRIIPRAAVVQYLLDKGLRNKSASLTSPFVVSEKMFLDKFIKRFKKESSYLLKLYEEKLINPAYTRNDKTCMP 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02652 414 Gene3D Transcription termination factor 3, mitochondrial 199 390 IPR038538 -
Vivi4g02652 414 SMART mt_12 326 360 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 SMART mt_12 73 117 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 PANTHER CGI-12 PROTEIN-RELATED 83 386 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 Pfam mTERF 271 377 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 Pfam mTERF 108 236 IPR003690 GO:0003690|GO:0006355
Vivi4g02652 414 FunFam Mitochondrial transcription termination factor-like 172 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02652 Vivi-Chr4 127689844 127691802 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02652 mTERF 8.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02652 K15031 - gmx:102663414 340.887