Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02651 ATGTATTCTGTTGCACTTCTGCCCTGCCGCACCGCCGCTGTGAAGCCACCCAATCACGAAGTCGCTATTTGGCCCTCTGCAACCGGAAAGAATAGATTCAAGGTAACGGAAAATTGTATTCATATTCAATATTTGAATCCATTTTCTAACAACAGTGTTCCCTTTCTAACAACAATGTTCAACTTCAATAGATTAACTCCACTATCTCCAAACCCTAATCCTCTTCTCCACCGCTACCCATCACTATTTTCCCTTCATTTCTCCACCAACACTTCCGATTCAACCTCATCCACCGTCTCAGATTCAAAACCTGACTCTGTTCTCAACTTCTTCAAAAACCACGGTTTCTCAGACTCCCAACTTCACAGCATGATTGCCAGGGTACCTGGCCTACTTTCCTACAACCCCTCCAAAAGGATCTTACCAAAGTTTCAATTTTTACTCTCCAAAGGGGCTTCTAACTCCGACATTGTTAACCTTGTCAGTAAGAACCCTAGAGTCTTGTCTCCTAGCTTGGAGAATCATATAGTCCCAACCTATGAATTGATTTATAGATTCTTGCAATCAGACAAGAACGTTATTGCTTCTGCAATTCAGAGTCCAGTTTTACTCTTTGATCATCGTGTACCGCGTAACATTGCAATGCTGATTGAGAATGGAGTGTCGGACTCTAACATTGCTAGAATGCTTCGGATTTGGAGTCGGATATTTAGTGAGCGCGACACGCTGAAGTTTGTGGAGGAAGTGAAGAATTTGGGGTTTAATCCTTCGAAAACAGTCTTCTCGATAGCATTGATTGCAAAAACATCGGTAAGCAAAAACTTGTGGGAGGAAAAAGTTGAGGTGTTTAAGAAGTGGGGTTGGTCGGATGAAGATGCTCTTGAAGCATTTAGAAAGAACCCTTATTGTATGTTAACATCTGTTGATAAAATAAATTTAGTGATGAGCTTTTGGGTGAATCAGCTCGGTTGGGGTGCTATGGCCCTTACGAAAGCACCATATATTTTATCGTCAAGTTTGGAAAAAAGGATCATTCCGAGGGCTGCTGTTGTGCAATATCTTCTCGATAAAGATATTTCCAAGAAATCTTATTGA 1095 0.4137 MYSVALLPCRTAAVKPPNHEVAIWPSATGKNRFKVTENCIHIQYLNPFSNNSVPFLTTMFNFNRLTPLSPNPNPLLHRYPSLFSLHFSTNTSDSTSSTVSDSKPDSVLNFFKNHGFSDSQLHSMIARVPGLLSYNPSKRILPKFQFLLSKGASNSDIVNLVSKNPRVLSPSLENHIVPTYELIYRFLQSDKNVIASAIQSPVLLFDHRVPRNIAMLIENGVSDSNIARMLRIWSRIFSERDTLKFVEEVKNLGFNPSKTVFSIALIAKTSVSKNLWEEKVEVFKKWGWSDEDALEAFRKNPYCMLTSVDKINLVMSFWVNQLGWGAMALTKAPYILSSSLEKRIIPRAAVVQYLLDKDISKKSY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02651 364 FunFam Mitochondrial transcription termination factor-like 172 364 - -
Vivi4g02651 364 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 SMART mt_12 326 360 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 SMART mt_12 73 117 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 PANTHER CGI-12 PROTEIN-RELATED 83 354 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 Pfam mTERF 108 236 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 Pfam mTERF 271 359 IPR003690 GO:0003690|GO:0006355
Vivi4g02651 364 Gene3D Transcription termination factor 3, mitochondrial 206 364 IPR038538 -
Vivi4g02651 364 Gene3D Transcription termination factor 3, mitochondrial 75 205 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02651 Vivi-Chr4 127689844 127691802 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02651 mTERF 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02651 K15031 - gmx:102663414 303.908