Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02649 ATGTTCAACTTCAATAGAACCCTAATCTACCTCAAAACCTTAACACCATTATCTCCAAACCCTAATCCTCTTCTCCACCGCTATCCGTCACTATTTTCCCTTCGTTTCTGCACCGATTCAACCTCATTTGCTGCCTCCTATCTCACCCACACTTTCGGTTTCTCCCCACAACTTGCTTCCAAACTTTGCTCCACCCACCGTCTCCAGTTCAAAACCTCCCAAAAACCTGACACTGTTCTCAACCTCTTCAAAAACCACGGTTTCTCAGACTCCCAACTTGGCAATATGATTGCCAAGGTACCTGGCTTACTTTCCTGCAACCCCTCCAAAAGGATCTTACCAAAGTTACAATTTTTACTCTCCAAAGCTACTTCTAACTCCGACATTGTTAACCTTATCAGTGAGAACCCTAGACTCTTGTCTCCTAGCTTGAAGAATCATATAGTCCCAACCTATGAATTGGTTTACAGATTCTTGCAATCAGACAAGAATGTTATTGCTGGTGTGATTCATAATCCAGATTTACTCTGTGATCATGTTGTGCCGCGGAACATTACAATGCTGATTGAGAATGGAGTGTCGGACTCTAACATTGCAAGATTGATTCGGATTCGGGGTCGAATGTTCAAGGCGCGCGACACGCCCAAGTTTGTGGAGGAAGTGAAGAATTTGGGGTTTAATCCTTCGAAATTTATTTTCTCGATAGCGTTGATGGCCAAAACAATGGTGAGCAAAGCCTTGTGGGAGGAAAAAGTTGAAACCTTTAAGAAGTGGGGTTGGTCGGATGAAGATGCTTTTGAAGCGTTTATAAAGAAACCTCATTGTATGTTAACATCTGTTGATAAAATAAATGTAGTGATGAGCTTTTGGGTGAATCAGTTGGGTTGGGATGCTATGGCTATTGCAAAAACGCCTTATATTTTAACATTGAGTTTGGAAAAAAGGATCATTCCGAGGGGTGCTGTTATGCAATTTCTTCTCGATAAAGGTTTGAGAAATAAGAGTGCAAGCTTAACTTGTCCATTTGTAGTGTCGGAGAAGATGTTTCTGGATATGTTTATAAAACGTTTTAAGAACGAGTCTTCTTTTCTATTAAAGTTGTATGAGGAAAAACTCATCAATCCTGCGTACACTAGGGATGATAAGACATGCATGCCGTAA 1161 0.41 MFNFNRTLIYLKTLTPLSPNPNPLLHRYPSLFSLRFCTDSTSFAASYLTHTFGFSPQLASKLCSTHRLQFKTSQKPDTVLNLFKNHGFSDSQLGNMIAKVPGLLSCNPSKRILPKLQFLLSKATSNSDIVNLISENPRLLSPSLKNHIVPTYELVYRFLQSDKNVIAGVIHNPDLLCDHVVPRNITMLIENGVSDSNIARLIRIRGRMFKARDTPKFVEEVKNLGFNPSKFIFSIALMAKTMVSKALWEEKVETFKKWGWSDEDAFEAFIKKPHCMLTSVDKINVVMSFWVNQLGWDAMAIAKTPYILTLSLEKRIIPRGAVMQFLLDKGLRNKSASLTCPFVVSEKMFLDMFIKRFKNESSFLLKLYEEKLINPAYTRDDKTCMP 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02649 386 Gene3D Transcription termination factor 3, mitochondrial 171 363 IPR038538 -
Vivi4g02649 386 PANTHER CGI-12 PROTEIN-RELATED 40 358 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 SMART mt_12 130 166 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 Pfam mTERF 80 209 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 Pfam mTERF 223 349 IPR003690 GO:0003690|GO:0006355
Vivi4g02649 386 FunFam Mitochondrial transcription termination factor-like 144 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02649 Vivi-Chr4 127608953 127610113 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02649 mTERF 1.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02649 K15031 - gmx:102663414 369.777