Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02648 ATGAGACCTAGGGACGATTCCCCGCCTAGATCTGGCTTGCTCATTCTGAAGTCTAGCTCTCCTGCGAAGAACGGACGCGTGATGGGTTTCACTACTAGGTCTCATTCTACCGTCGTTGTTTGCAATTCTGGTCATTTTCGGATATTGCATCTTCGAAAACCAGAATGGTCCAAATTTGGAGTGTCCTACCTCATCCACACTTTCGGTTTCTCCCCACAATTTGCTTCCAAACTCTGCTCCACTTACAAAGTTAAATTCAGAACCACCCAAAAACCTGATTCAGTTCTCAACTTCTTTAGAAACCACGGTTTCTCAGAACCCCAATTACGTGATTTGATTGCAAAGGGACCCTATCTCCTTTCCTGCAACCCATCCAAAAGGGTCTTGCCAAAGTTTCAATTTTTTCTCTCCAAAGGTGCTTCTAACTCCGACATTGTTAAACTTGTCACTAAAAGACCATGTGTTTTGTCTACAAGCCTCAAGAATCAAATAATCCCAACCTATGAATTGACATATAGATTCCTTCAATCCGACAAGGACACTATTGCTTGTGCAGTTCACACTCCAACTTTACTTAGTCACCGTCTAGTGTCGCATAACATTAGAATGTTAATTGATAATGGAGTGCTAGACTCTAGCATTGCAAGATTGCTTCAGAGGCAAACTCGTTCGTTGGATACACCTGACATGTTGAAGCTGGTGGAGGAATTAAAAGATTTGGGTTTTAATCCTTCGAAAGCAGCCTTTGGTACAGCATTGGCTGCAAAAACAACATTAACCAAAACTCGGTGGAAAGAGAAAGTCGATGCCTTTAAGAAATGGGGCTGGTCGGATGAAAATGTTCTTGATGCATTTAAAGGCAGCCTAAATTTGGGTTGGGATGCTCTTGCCCTTACCAAAGATCCATTAGTTTTTTCAACCAGTTTGGAAAAAAAGATCATTCCAAGGGCACCAATAGTGCAATATCTGCTGAAGAAAGGTTTGCGAAAAACAAATGCAAGTTTAACTTGTCCTTTTGTTTGTCCTGAGAAGCAGTTTCTTGACATGTGTATAAAACCTTTTGAGAATGAGTCTTCTTATCTTTTAAAGCTGTACGAGGAAAAACTCAATCTCGCATAG 1119 0.4111 MRPRDDSPPRSGLLILKSSSPAKNGRVMGFTTRSHSTVVVCNSGHFRILHLRKPEWSKFGVSYLIHTFGFSPQFASKLCSTYKVKFRTTQKPDSVLNFFRNHGFSEPQLRDLIAKGPYLLSCNPSKRVLPKFQFFLSKGASNSDIVKLVTKRPCVLSTSLKNQIIPTYELTYRFLQSDKDTIACAVHTPTLLSHRLVSHNIRMLIDNGVLDSSIARLLQRQTRSLDTPDMLKLVEELKDLGFNPSKAAFGTALAAKTTLTKTRWKEKVDAFKKWGWSDENVLDAFKGSLNLGWDALALTKDPLVFSTSLEKKIIPRAPIVQYLLKKGLRKTNASLTCPFVCPEKQFLDMCIKPFENESSYLLKLYEEKLNLA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02648 372 Gene3D Transcription termination factor 3, mitochondrial 75 199 IPR038538 -
Vivi4g02648 372 PANTHER CGI-12 PROTEIN-RELATED 61 355 IPR003690 GO:0003690|GO:0006355
Vivi4g02648 372 FunFam Uncharacterized protein 57 197 - -
Vivi4g02648 372 Pfam mTERF 96 285 IPR003690 GO:0003690|GO:0006355
Vivi4g02648 372 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Vivi4g02648 372 SMART mt_12 110 141 IPR003690 GO:0003690|GO:0006355
Vivi4g02648 372 SMART mt_12 215 243 IPR003690 GO:0003690|GO:0006355
Vivi4g02648 372 SMART mt_12 295 329 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02648 Vivi-Chr4 127603743 127606142 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi4g02648 mTERF 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02648 K15031 - gmx:102663414 302.753