Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02580 ATGGCTTCCACAAAAGGCAATGATGACCATGAGCCACAGAGAAGCTATTGGAGATGCAGCAAACAAGATTTCTTTCCAGAGGAATCCTTTCAAAGCTGGCACAACTATGGTTCTGCTCTTTCACAAACATGGTTAAGGTTCAAGGACCGTGTTTCGACCAGATCGGACGATGCAACCGAGTCGCAAGAGCTTCAGAAACAAAGTGAGAATGACATGAAAAAATGTCTCAACTGGTGGGACCTTATCTGGTTTGGCTTTGGTGCAGTGATTGGTGCAGGAATCTTTGTGCTAACTGGTCAAGAAGCTCATAACCATGCTGGTGCGGCGATAGTCTTATCCTATGTAGCTTCAGGAATTTCAGCAATGCTTTCTGTTTTCTGTTATACAGAATTTGCCGTTGAAGTTCCAGCTGCTGGTGGTTCATTTGCTTACCTAAGAATTGAATTAGGTGATTTTATTGCTTTCTTAGCAGCCGGTAACATACTTCTCGAATGCGTGCTTGGAGGTGCAGCAGTATCAAGATCATGGACATCTTACTTCACAAGCCTTTTGAATCGTCCGAAAGATTCATTTCGAATCAAAGCACATCATCTCAAAGAAGGATACAATTTACTTGACCCTATAGCAGTTGCTGTTCTGTTAACCGCCGGAACGATCGCAATGATCAGTACACGAAAAACTTCGCTCCTCAATTGGATTGCATCGGCAATCAACACGGCTGTGATCATATTCGTAATCATTGCAGGGTTTCTTCACGCAGACACAGCGAATTTGACGCCTTTTTTACCTTATGGAGCTAGAGGTGTATTTCAAGCATCAGCAATTCTTTATTTTGCATATGGAGGTTTCGAGAGTCTTGCAACAATGGCTGAAGAAACTAAAAATCCACCAAAGGATATACCAATAGGTTTAATAGGTTCAATGTCGGTGATCATCGTGATTTATTGTTTGATGGCACTTTCACTAAGCATGATGCAGAAGTACACAGACATTGATACAGGTGCAGCTTTTTCAATTGCATTCCAGAAAGTAGGAATGAATTGGGCAAAATACGTCGTCGCTTTCGGTGCATTGAAGGGTATGACAACAGTTCTTTTAGTAGGAAGATTAGGTCAGGCGCGATACATCGTTCACATTGCGCGTTCGCACATGATTCCTCCATGGTTTGCTCGTGTTCATCCCAAAACAGGAACACCAATAAACGCAACACTTCTGATTACAATCACAAGCGCTTGCGTAGCCTTTTTCACTAGCTTGGACGTGTTATCGAGTTTGATATCAGTAAGTACACTTTTCGTTTTCGCGCTGATATCGATTGCGCTTCTGGTAAGAAGGTACTATGTTAGAGGAGTTACAACTAAAGAGAATCAGTTAAAGCTAGTTATATTTTTGTTTCTCATTGTTGGTTCTTCGATGGGAACTTCAGCTTATTGGGGATTGAGGCCTAATGGTTGGATTGGATATACGGTTACCGTACCTGTTTGGTTTTTTTCGACTCTTGGGATGTCGGTTTTTTTGACTCAACAAAGGAAACCAAGATTTTGGGGAGTTCCACTTGTTCCATGGCTGCCATCTTTGTCAATTGCAACAACTGTTTTTCTCATGGGATCTTTGGAATATGATGCATTTGTGAGATTTGCAATATGCACTTTGGTTATGTTGGTTTACTATGTTTTCTTTGGTCTTCATTCAACTTATGATATGGCTCATCTACAAGAGAAGGTGCAAAATATTAATGTGGATTACAAAGAGACTGCTAGGATTGAAGGGCCTTAA 1776 0.4127 MASTKGNDDHEPQRSYWRCSKQDFFPEESFQSWHNYGSALSQTWLRFKDRVSTRSDDATESQELQKQSENDMKKCLNWWDLIWFGFGAVIGAGIFVLTGQEAHNHAGAAIVLSYVASGISAMLSVFCYTEFAVEVPAAGGSFAYLRIELGDFIAFLAAGNILLECVLGGAAVSRSWTSYFTSLLNRPKDSFRIKAHHLKEGYNLLDPIAVAVLLTAGTIAMISTRKTSLLNWIASAINTAVIIFVIIAGFLHADTANLTPFLPYGARGVFQASAILYFAYGGFESLATMAEETKNPPKDIPIGLIGSMSVIIVIYCLMALSLSMMQKYTDIDTGAAFSIAFQKVGMNWAKYVVAFGALKGMTTVLLVGRLGQARYIVHIARSHMIPPWFARVHPKTGTPINATLLITITSACVAFFTSLDVLSSLISVSTLFVFALISIALLVRRYYVRGVTTKENQLKLVIFLFLIVGSSMGTSAYWGLRPNGWIGYTVTVPVWFFSTLGMSVFLTQQRKPRFWGVPLVPWLPSLSIATTVFLMGSLEYDAFVRFAICTLVMLVYYVFFGLHSTYDMAHLQEKVQNINVDYKETARIEGP 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02580 591 FunFam Cationic amino acid transporter 5 70 505 - -
Vivi4g02580 591 Pfam Amino acid permease 76 466 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vivi4g02580 591 Pfam C-terminus of AA_permease 515 564 IPR029485 -
Vivi4g02580 591 Gene3D Amino acid/polyamine transporter I 70 500 - -
Vivi4g02580 591 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 59 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02580 Vivi-Chr4 124938067 124941169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02580 13 572 Organic Solute Cotransporters AT2G34960 71.836 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02580 - - vvo:131633824 1109.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02580 4 124938067 124941169 Vivi4g02580 4 124938067 124941169 ECH