Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02539 ATGGCTTCGGATTTGGAAATTGATGAAGAGAATGATAACAAAGGTAATATGTGGGATATGGAGCAGAAACTCGACCAATCGATGGACGAGGAAGCAGGAAAGCTCAGAAATATGTATAGAGAAAAATTTTCGGCACTGTTGGTTATACGGCTCGCATATCAGAGTCTGGGTGTAGTTTATGGAGATTTGGGAACTTCTCCGTTGTATGTTTTCTATAACACGTTTCCTCACGGAGTTGATGATCCAGAGGACGTGATCGGAGCTCTTTCGTTGATCATTTACTCGCTTACTCTTGTCCCGTTGCTCAAATATGTTTTTATTGTGTTACGAGCAAATGACAACGGTCAAGGTGGAACACTGGCGCTTTATTCTTTGCTATGCCGACATGCCAATATTAAAATCATTCCTAACCAGCATCGCACGGATGAAGAATTGACAACATATAGCCGGACTACGATCCATGAAAGGTCGTTTGCGTCGAAAACTCAGAGATGGTTAGAGGGACATTTTATTAAAAGAGCCATTCTTATTCTTGTCCTTGTTGGTACCTGCATGGTGATTGGAGATGGTATTCTTACTCCGGCTATATCTGTTTTATCCGCTGCAGGTGGCATCCGAGTAAACAAACCTGAAATTGATAACAGAGTAGTGGTGGTTGTTGCTGTTATAATATTAGTTGGGCTATTCAGCGTGCAACATTATGGTACCGATAAAGTTGGTTGGCTCTTTGCTCCAATTGTTCTGGTTTGGTTTCTCCTAATTGGAGGCATAGGTATATACAACATTTGGAGATTTGGTAGCAGAGTCCTAAAGGCCTTTTCGCCTCTCTATGTGTATCGGTATATACGAAACGGAAGAAAAGATAGTTGGCTTTCCCTTGGCGGAATCTTGCTCAGCATAACCGGGACAGAAGCTCTCTTTGCCGACTTAGCCAATTTTCCAGTCTCGTCGGTACAAATTGCATTTACTCTTCTTGTGTTTCCTTGCCTTCTTTTAGCGTATTCTGGACAGGCGGCTTATCTGGTGCATAACTTGCATCATTCACAAGATGTTTTTTATCGCTCTATTCCAGAAAAAATATACTGGCCAGTATTTGTTGTTGCAACACTAGCAGCAATAGTTGCGAGCCAAGCCACAATAACAGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGCTGTTTCCCAAGAGTCAAAGTCGTACATACATCGAAAAAGTTCCTTGGCCAGATATATATCCCGGATATCAATTGGATTCTTATGGTTCTTTGCATTGCTGTTACTGCTGGCTTTAAAAATCAAAGTCAGATTGGTAACGCATATGGTACTGCTGTTGTGTTAGTCATGTTGGTTACAACACTGCTCATGGTTTTGGTAATGATATTAGTTTGGCACTGCCATTGGATTCTTGTGGTTTTGTTCACTGGCTTATCGTTGATTGTCGAATGCACATACTTTTCTGCTGTACTCTTCAAAGTCGATCAAGGCGGGTGGGCCCCACTTGCAATTGCCGGAGTATTTCTGCTTGTTATGTATGTTTGGCATTATGGTACACTGAAGCGTTACGAGTTTGAATTGCATAGTAAAGTCTCAATGGCATGGATTCTCGGACTCGGTCCCAGTTTAGGACTAGTTCGTGTTCCAGGAATCGGCCTAGTCTACACAGAACTCGCAAGCGGAGTTCCCCACATATTTTCTCATTTTATTACCAACCTACCAGCCATTCATTCTGTCGTTGTTTTCGTCTGTGTGAAATATCTTCCCGTCTACACCGTCCCGGAAGAAGAACGGTTCCTTGTCAAGCGTATCGGACCAAAGAACTACCACATTTTTAGATGCGTGGCGCGATATGGTTATAAAGACCTGCATAAGAAAGACGATGATTTCGAGAAGAAACTCTTTCACAACCTTTTCATGTTTGTTCGACTTGAATCCATGATGGAAGGTTGCTCGGATTCGGAATACAGTTTATGTGAACCGCAAACCGAGCAGTCGAGAGATTTCATGTTGAATAACAACGGAAACACAAATTCATTGAGTAACGGGGATTTAACAATTTCATCAGTCGACTCAATTGTTCCTGCAAGATCGCCGGCACATGTGAATGTTACTTTTCAATCCTCTAGCCATTACAGCGAGGTTGATGAATATGAGTTTTTAAGCAACTGTAGAGAAGCTGGTGTTGTTCACATACTAGGAAACACAGTTGTGGTTGCAAGTAGGGATTCAAGATTCTACAAGAAAATAGCAGTTGATTATATATATGCATTTCTTAGAAAGATATGCAGGGAAAATAGTGTGATCTTCAATATTCCTCATGAGAGTCTCTTAAATGTTGGTCAAGTTTTCTATGTATAG 2361 0.4147 MASDLEIDEENDNKGNMWDMEQKLDQSMDEEAGKLRNMYREKFSALLVIRLAYQSLGVVYGDLGTSPLYVFYNTFPHGVDDPEDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTLALYSLLCRHANIKIIPNQHRTDEELTTYSRTTIHERSFASKTQRWLEGHFIKRAILILVLVGTCMVIGDGILTPAISVLSAAGGIRVNKPEIDNRVVVVVAVIILVGLFSVQHYGTDKVGWLFAPIVLVWFLLIGGIGIYNIWRFGSRVLKAFSPLYVYRYIRNGRKDSWLSLGGILLSITGTEALFADLANFPVSSVQIAFTLLVFPCLLLAYSGQAAYLVHNLHHSQDVFYRSIPEKIYWPVFVVATLAAIVASQATITATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMVLVMILVWHCHWILVVLFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGVFLLVMYVWHYGTLKRYEFELHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDDFEKKLFHNLFMFVRLESMMEGCSDSEYSLCEPQTEQSRDFMLNNNGNTNSLSNGDLTISSVDSIVPARSPAHVNVTFQSSSHYSEVDEYEFLSNCREAGVVHILGNTVVVASRDSRFYKKIAVDYIYAFLRKICRENSVIFNIPHESLLNVGQVFYV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02539 786 Pfam K+ potassium transporter 53 622 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi4g02539 786 NCBIfam potassium uptake protein 51 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi4g02539 786 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 38 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02539 Vivi-Chr4 123519958 123523596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02539 6 786 Inorganic Solute Cotransporters AT2G35060 76.718 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02539 K03549 - gmx:100776628 1290.4