Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02483 ATGGTTTATGAATATATGCCAAATGGCACACTAAGGGATCACCTTTCTGTTACATCAAAAGAACCTCTGACTTTTATCACGAGATTGAAAATCGCGCTAGGGTCAGCTAAAGGTCTCATGTATCTACACAATGAAGTTGATCCTCCCATATTTCATCGGGATGTCAAGGCCAGCAACATATTATTGGACTCAAAGCTCGCTGCAAAAGTGGCAGATTTTGGACTTTCATGGCTTGCCCCAGTTCCAGATATGGAAGGCATTGTTCCTGGTCATGTATCTACAGTGGTAAAAGGGACACCAGGTTACCTTGATCCGAAGTACTTCTTAACTCACAAGTTGACCGACAAGAGTGATGTTTACAGTCTCGGTGTTGTGTTTCTTGAACTTTTAACCCGAATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTCATTCTTTCATACCAAGCTGGCGTAATATTTTCAATCATCGACGAGCGAATGGGGTCAGTAACAATACTGATGTGGGATGTTGATGCAATTATGTGCATTTCTTGGAGCAGTTGTCCCGAATTGGCTTAA 567 0.418 MVYEYMPNGTLRDHLSVTSKEPLTFITRLKIALGSAKGLMYLHNEVDPPIFHRDVKASNILLDSKLAAKVADFGLSWLAPVPDMEGIVPGHVSTVVKGTPGYLDPKYFLTHKLTDKSDVYSLGVVFLELLTRMHPISHGKNIVREVILSYQAGVIFSIIDERMGSVTILMWDVDAIMCISWSSCPELA 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02483 188 Gene3D Transferase(Phosphotransferase) domain 1 1 186 - -
Vivi4g02483 188 SUPERFAMILY Protein kinase-like (PK-like) 1 175 IPR011009 -
Vivi4g02483 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Vivi4g02483 188 PANTHER RECEPTOR-LIKE PROTEIN 55 1 160 - -
Vivi4g02483 188 Pfam Protein kinase domain 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02483 188 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02483 188 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02483 Vivi-Chr4 121166275 121168462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02483 1 163 Receptor kinase-like Gene Family AT5G01950 69.939 2.78e-73 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi4g02483 Pkinase 2.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02483 - - vvo:131595122 380.948