Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02464 ATGGCAGCACCAAGCACTCAGCATACACAGATTATTGAAGTCAGTGGAGATCTTCCTGATGTAGTAAGGAAAGTTTGTGGGGAAGCAACATGTGAGTTCTCAGGTGCTGGTGCCATCTCAAAGGATGCTGAAGAACGATCAACATCGATGCGGAAGCTTCTGATAGCAGTGATTCTTTGCGTTATTTTCATGGTTGTTGAGGTTGTTGGTGGTATTAAGGCAAACAGTCTTGCAATATTGACTGATGCTGCGCATTTGCTTTCCGATGTTGCAGCATTTGCCATCTCCTTATTTTCTATATGGGCCGGGGGATGGGAACCAAATCCTCGTCAGTCGTTTGGATTTTTTAGAATAGAGATTCTTGGCGCTTTGGTTTCTATGCAAATGATATGGCTGCTTGCTGGGATTCTTGTGTATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAAATGTGGATGGGTTTTTAATGTTTGTAGTTGCTGCATTTGGTCTTGTGGTTAACATCATTATGGCTTTGGTATTGGGTCATGATCACGGACACGGCCATGGCCACGGACATGGACATGATCACGGTCACGGACATGATCACGGACATGGACATGATCATCACGGCCATATCCATGGTGTTTCAGTTTCTACTAATCATGATATAAAGCAAACACAAGATGAGCATCATCACGCACACAGTGATCACACTCACCCTCATGATGTTGAAAAGCATTCGAAGGATGCACACCTCCATACTCATGAAAATCCCACGCAGGATCTCAAAGAGCACAAAGAGCGTGCTGTCCCACTTCTTGGTGAATCAAAAGTCAGTGATGAGAAGAAGAAACGCAACATAAACGTACACGGGGCTTATCTCCATGTACTTGGGGATTCTATCCAGAGTGTCGGAGTAATGATTGGCGGAGCAATCATATGGTATAAACCTGAATGGAAAATAGTTGATTTAATTTGCACTCTAATCTTTTCTGTGATTGTTTTGGCCACAACTATCAACATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACGCCGCGTGAGATAGATGCTACTCAACTTCAAAAGGGCCTATTGGAGATGGAAGAAGTGGTGGCTATTCATGAGCTTCACATATGGGCTATTACAGTTGGGAAGGTATTGCTAGCCTGCCATGTTAAAATTAATCCTGAAGCTGATGCTGACGCGATGTTGGACAAAGTTATAGACTACATCAAGAGGGTGCATAACATTAGTCATGTAACTATCCAGATAGAACGCTAG 1272 0.4363 MAAPSTQHTQIIEVSGDLPDVVRKVCGEATCEFSGAGAISKDAEERSTSMRKLLIAVILCVIFMVVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQMIWLLAGILVYEAIARLIAGPQNVDGFLMFVVAAFGLVVNIIMALVLGHDHGHGHGHGHGHDHGHGHDHGHGHDHHGHIHGVSVSTNHDIKQTQDEHHHAHSDHTHPHDVEKHSKDAHLHTHENPTQDLKEHKERAVPLLGESKVSDEKKKRNINVHGAYLHVLGDSIQSVGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEEVVAIHELHIWAITVGKVLLACHVKINPEADADAMLDKVIDYIKRVHNISHVTIQIER 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02464 423 NCBIfam cation diffusion facilitator family transporter 50 423 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi4g02464 423 MobiDBLite consensus disorder prediction 180 210 - -
Vivi4g02464 423 Gene3D Cation efflux protein transmembrane domain 49 344 IPR027469 -
Vivi4g02464 423 MobiDBLite consensus disorder prediction 180 245 - -
Vivi4g02464 423 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 346 IPR027469 -
Vivi4g02464 423 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 352 422 IPR036837 -
Vivi4g02464 423 Pfam Cation efflux family 53 345 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vivi4g02464 423 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 7 423 - -
Vivi4g02464 423 MobiDBLite consensus disorder prediction 218 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02464 Vivi-Chr4 120699552 120703355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02464 1 423 Inorganic Solute Cotransporters AT2G46800 65.421 8.39e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02464 K14689 - gmx:100790458 577.785