Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02459 ATGGATAAATTTCTAATCGACATGGAAAGGGAGAAGCCAATAAGATTCACTGGCCAACAGCTAAGAATTGCAACAGACAACTATTCCAACTTGTTAGGATCAGGAGGATTTGGAACAGTTTACAAAGGAATTTTCAGTAACGGAACAATCGTAGCTGTGAAGGTTCTACGCGGTAGTTCCAACAAGAAAATCGACGAACAATTCATGGCAGAAGTCGGAACAATTGGTAGGATTCATCACTTTAATCTCGTTAGGCTATACGGATTTTGCTTTGAACGAAACTTGATCGCGCTTGTTTATGAATACATGGGGAATGGATCACTTGATAGGTATTTGTTTCATGAAAAAAAGGTGCTGGAATACGAAAAGCTTCATGAGATTGCGATCGGTACAGCACGAGGCATTGCTTACTTACACGAAGAGTGCCAACATAGAATAATCCACTATGATATAAAACCAGGAAATATTCTCTTAGACATGAATTTCAACGCTAAAGTTGCTGATTTCGGTTTGGCCAAACATTGCAACAGGGACAATACTCACATAACGATGACCGGAGGAAGAGGGACGCCTGGCTATGCTGCACCCGAGCTTTGGATGCCATTTCCAATAACTCACAAATGCGATGTTTATAGTTTCGGTATGCTATTATTCGAAATTGTAGGTAGAAGAAGAAACCTTGAGATTAAGAATAATGATAGCCAAGAATGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGACTATTAGGGGAAGCAATGGTAGTTTGTGGAATAGAAGAGAAAAATAAAGAGATTGCTGAGAGAATGGTTAAGGTAGCTTTATGGTGTGTTCAATATAGGCCAGAGTTAAGGCCTATAATGAGTGTTGTGGTGAATATGTTAGAAGGTACATTGGAAATTCCAAAGACTTTGAACCCTTTTCAACATTTGTTTGCTGGAAATAATTTTGCTACTCAATCAGTGCAAGTGTCAAATACTTATACAACTACTGTGACTTCTTCTACCTCTTCTGTTATGGTAAGTGATTCAAGTATTGTGTGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTGGCAAATAGCATAGTGTGA 1101 0.3842 MDKFLIDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTIVAVKVLRGSSNKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFHEKKVLEYEKLHEIAIGTARGIAYLHEECQHRIIHYDIKPGNILLDMNFNAKVADFGLAKHCNRDNTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIVGRRRNLEIKNNDSQEWFPIWVWKKFDAGLLGEAMVVCGIEEKNKEIAERMVKVALWCVQYRPELRPIMSVVVNMLEGTLEIPKTLNPFQHLFAGNNFATQSVQVSNTYTTTVTSSTSSVMVSDSSIVCATPIMRKYEIELANSIV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02459 366 FunFam Putative receptor-like protein kinase 103 304 - -
Vivi4g02459 366 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Vivi4g02459 366 SMART serkin_6 26 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02459 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Vivi4g02459 366 Pfam Protein kinase domain 30 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02459 366 Gene3D Phosphorylase Kinase; domain 1 4 102 - -
Vivi4g02459 366 Gene3D Transferase(Phosphotransferase) domain 1 103 308 - -
Vivi4g02459 366 PANTHER OS07G0415500 PROTEIN 8 308 - -
Vivi4g02459 366 ProSiteProfiles Protein kinase domain profile. 26 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02459 366 FunFam serine/threonine-protein kinase PBS1-like 2 102 - -
Vivi4g02459 366 SUPERFAMILY Protein kinase-like (PK-like) 10 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02459 Vivi-Chr4 120616295 120617845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02459 15 331 Receptor kinase-like Gene Family AT5G38280 39.634 6.81e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Vivi4g02459 Pkinase 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02459 - - gmx:100803355 613.609