Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02457 ATGAGTAATTTTCACTATCAGTTTCCTAATTCTCCTCCTTCTTTTTACAGTTCATCAGATGATTTTAATACACAAGCTCAAAACACTTTTGACAGATTTGGTGACACGGTTGATTCTTCTATGAAATGGGCTGTAGCAGAATCTATAGTATATGGAATTGTGGTCATAACCGCTGTTATAGCAATAGTATATGCAATTATTGAGTGCTTGAAGAAAGCAGGAACAGCAATTCCTGCATACACTCAGATTTCAACAACAGAAAAGGATAATCAAATATTCTCAAACTCTTCAATTCCTTCAACCGGTAAAATCGAAGTGGTTATACCACAAGAGTCATCAAGAGCTGAATTTCCAACCATGGAAAGATTCTTAAGCAACATCAACCGAGAAAAACCAATCAGATTCACACCAGATAGCCTCGACGAAATCACCAAAAGCTACTCAACCATACTAGGTTCTGGCGCATTCGGCTTTGTCTTCAAAGGAGAGTTATCGAGCGGAGAAAACGTTGCTGTCAAAGTTCTCAACTGTTTGGATATGGGAATGGAAGAGCAATTCAAAGCCGAAGTTAGCACGATCGGAAGAACTTACCATAACAATCTAGTCAAACTTTATGGATTTTGTTTTCATCATGACACTAGAGCACTTGTTTATGAATGCGTTGAAAATGGTTCGCTAGATAAGTACTTGTTTGGAAGCACGAATCGCGATGTTGAGCTTCAAAAGCTTCACGAGATTGCTATTGGAACGGCTAAAGGAATCGCGTATTTACACGAGGAATGTCAGCATAGGATAATACATTATGATATCAAACCAGAAAATGTTCTTCTTGATATGAAATTAATACCGAAGATAGCTGATTTCGGGTTAGCGAAGTTAAGAAATAGAGAAAGTAACAACACTGATATAAATACTCACTTTAGAGGGACAAGGGGTTACGCTGCACCGGAGTTATGGAAGGCTTATCCAGTGACGTATAAGTGTGATGTTTATAGTTTTGGTATTCTTCTGTTTGAAATTGTGGGGAGGAGAAGGCATTTTGATTCGAGCTATAGTGAATCGCAGCAATGGTTTCCGAAATGGGCTTGGGAAATGTTTGAGAATAATGAGTTGGTTGTTATGCTCGCGTTTTGTGGAGTTGAAGAGAAGGATAATGAGAGAGCTGAGAGAATGTTGAAGGTTGCTCTATGGTGTGTTCAGTATTCGCCGAATGATAGGCCTCTGATGAGTACTGTGGTGAAGATGTTAGAAGGTGAGATAGAAATTTTGCCTCCTCCGTTTCCGTTTCATAATCTTGTTCCTGGTAAACAAAATTTGAGATCGGAGGGAAGTGTTGCGGATTCGGATACTACTGCATCGTCCTGGAATACAGAATCTGTTAGGGAATGTTTCGGAATAAAACACAATGCATTTGAGATCGAAAATGCTGCATAG 1434 0.3912 MSNFHYQFPNSPPSFYSSSDDFNTQAQNTFDRFGDTVDSSMKWAVAESIVYGIVVITAVIAIVYAIIECLKKAGTAIPAYTQISTTEKDNQIFSNSSIPSTGKIEVVIPQESSRAEFPTMERFLSNINREKPIRFTPDSLDEITKSYSTILGSGAFGFVFKGELSSGENVAVKVLNCLDMGMEEQFKAEVSTIGRTYHNNLVKLYGFCFHHDTRALVYECVENGSLDKYLFGSTNRDVELQKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLDMKLIPKIADFGLAKLRNRESNNTDINTHFRGTRGYAAPELWKAYPVTYKCDVYSFGILLFEIVGRRRHFDSSYSESQQWFPKWAWEMFENNELVVMLAFCGVEEKDNERAERMLKVALWCVQYSPNDRPLMSTVVKMLEGEIEILPPPFPFHNLVPGKQNLRSEGSVADSDTTASSWNTESVRECFGIKHNAFEIENAA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02457 477 Gene3D Phosphorylase Kinase; domain 1 119 220 - -
Vivi4g02457 477 SUPERFAMILY Protein kinase-like (PK-like) 126 417 IPR011009 -
Vivi4g02457 477 SMART serkin_6 145 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02457 477 Gene3D Transferase(Phosphotransferase) domain 1 221 422 - -
Vivi4g02457 477 FunFam Putative receptor-like protein kinase 221 423 - -
Vivi4g02457 477 ProSiteProfiles Protein kinase domain profile. 145 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02457 477 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 426 - -
Vivi4g02457 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Vivi4g02457 477 Pfam Protein kinase domain 149 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02457 477 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02457 Vivi-Chr4 120568711 120570939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02457 134 456 Receptor kinase-like Gene Family AT5G38280 39.879 3.20e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Vivi4g02457 Pkinase 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02457 - - aprc:113852543 665.611