Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02442 ATGAGCATGGATGTTACTGGTATCGAAGGAAGCAAGATGTTTTCATCTATTCAAGCTCAGGAGATCCATGGCTTCAATTTTTCAAGGAAATTCTATCCTACTGAATCTGATGCAGAGCTATCTGATTCAGCTTCTTCAACCTCAACCAGGACAATGATTAAGAAGCACGCGGATACATTCTCTATGAAGTTTGGAAGATCATCAAGTACACGGGAGCTAGAATATGTGAAAGAGATACTATGTAATGTTCAGTTGATATATATAGATTTTTCCCTCGGCCGAGCACGCGAGGTTGTGAACTCTCATTTGTTCAATCAGTTGGAAGCCGAAGGGGATGTTACAAGAGTGACGATGAATCGAGGATAG 366 0.4098 MSMDVTGIEGSKMFSSIQAQEIHGFNFSRKFYPTESDAELSDSASSTSTRTMIKKHADTFSMKFGRSSSTRELEYVKEILCNVQLIYIDFSLGRAREVVNSHLFNQLEAEGDVTRVTMNRG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02442 121 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 14 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02442 Vivi-Chr4 119844982 119846005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02442 72 120 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 38.776 1.34e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02442 - - vvo:131599559 224.942