Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02311 ATGAAGTCAAGTGAGCACAAAAGTGAAACAATGTTGTTTGTTCTTGGAGGGATAGTAGTTGTCATCATAATATTGATTCTTTGTTGGATTGTATTTAGAAAGCGTATTAAAGGATCAGAAAAACCAGTTCCAATTGAAGCTGAGCCTACAGCTGCTACGAAGACGATATTTCCATCGGTACAACACTCATCAGGGTCCATGGAGTTATATAGTATGAGCCTTAGGTCAATTAGCTACTTTGACTACTACACTTTGAGAAAGGCAACCAATAATTTTTTTCATGGTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGAAAGTTGGAAGATGGAAGAATGATTGCTGTTAAGGCACTGGCTCTTAACAAATCTCAACAGGGAGAAAGAGAATTTTTGGCAGAAGTGAAATTGATCACAAGTATGCAACACAAAAATTTGGTTCGTCTTCTCGGAAGTTGCATAGACGGACCTCAAAGACTACTTGTTTACGAATACATGAAAAATCGAAGTTTAGACCTCTTCGTATATGGAAACAATGATCAATTTTTGAACTGGAGCACTAGGTTTCAAATTATACTCGGAGTAGCGCGGGGATTACAATATCTTCACGAAGATTCACACTTAAGAATCGTTCATCGTGATATCAAAGCAAGCAATATTCTTCTGGACGATAAATTTTTGCCCAGAATCGGAGATTTTGGACTAGCAAGGTTTTTCCCAGACGATCAAGCTTATCTTAGCACGCAATTCGCAGGAACATTAGGCTATACAGCTCCTGAATATGCTATTAGAGGGGAATTATCAGTAAAAGCTGATACCTATAGTTTTGGAGTTCTTCTTCTTGAGATTATATGTTGCAGAAAAAACACAGATCATACTTTACCACCAGAAATGCAGTATCTTCCAGAATATGCATGGAAATTATACGAAAAATCAAGTTTATTGGATCTTGTTGATCCAAAGCTGAAACAAGATGGATTTGTAGAAAAAGATGTTCTGCAAGCAACTCATGTGGCACTCTTATGCCTTCAACCTCACGCACATTTGAGACCACCAATGTCAGAAATTGTGGCATTGTTGACATTCAAAATTGAAATGGTTACCACGCCGATGAGGCCGGCGTTTCTTGATCGAAGGCCGAGGAAGGATGAAGATAACCATTCTTTTGAAGCATCATTTGTCAAAGAATCATGA 1203 0.384 MKSSEHKSETMLFVLGGIVVVIIILILCWIVFRKRIKGSEKPVPIEAEPTAATKTIFPSVQHSSGSMELYSMSLRSISYFDYYTLRKATNNFFHGNLLGSGGFGPVYQGKLEDGRMIAVKALALNKSQQGEREFLAEVKLITSMQHKNLVRLLGSCIDGPQRLLVYEYMKNRSLDLFVYGNNDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFLPRIGDFGLARFFPDDQAYLSTQFAGTLGYTAPEYAIRGELSVKADTYSFGVLLLEIICCRKNTDHTLPPEMQYLPEYAWKLYEKSSLLDLVDPKLKQDGFVEKDVLQATHVALLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDEDNHSFEASFVKES 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02311 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Vivi4g02311 400 SMART serkin_6 92 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02311 400 CDD STKc_IRAK 98 364 - -
Vivi4g02311 400 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 169 373 - -
Vivi4g02311 400 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 15 390 - -
Vivi4g02311 400 Gene3D Transferase(Phosphotransferase) domain 1 169 372 - -
Vivi4g02311 400 Pfam Protein tyrosine and serine/threonine kinase 96 361 IPR001245 GO:0004672|GO:0006468
Vivi4g02311 400 FunFam Cysteine-rich receptor-like protein kinase 10 56 168 - -
Vivi4g02311 400 SUPERFAMILY Protein kinase-like (PK-like) 66 366 IPR011009 -
Vivi4g02311 400 Gene3D Phosphorylase Kinase; domain 1 54 168 - -
Vivi4g02311 400 ProSiteProfiles Protein kinase domain profile. 92 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02311 400 MobiDBLite consensus disorder prediction 380 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02311 Vivi-Chr4 114597217 114599359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02311 68 392 Receptor kinase-like Gene Family AT1G56120 46.769 2.03e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi4g02311 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02311 - - cam:101498319 602.438