Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02300 ATGGTCAGCATGAATGAGATGGCTGAGATCGTTCTTGGTTTTGACGATAAGAAAACTCCTATACATCACATTCCTGGCCCAGAGGGCGTTCGTGGTCGTAACTCAGACAATACACTTATCAAAGAGAAACTTGGCTGGGCTCCAACAATGAAGTGGAAGGGAGTTTTGACATCTGGATTAGTGTTTATTGTGACAGCATGGTGTGTAAGGAAGAAAGGTCCTGTGTATGCATCTGCATTCAACCCTGTTAACCTTTTGATTATGGCTATTGCTGCTTCCTTGTTGTTAGATGAGACTCTCTATGTTGGAAGTGTAATTGGAGGTGTGCTAATTGTGGGTGCCTTGTACATGGTGTTATGGGCTAAGAGCAAAGAAACTAACTTCATTGCTCAAGAATTTGAAAGGTCAACTGAGGTTGTTGTTATGTCCAAGACATTAGATCATGACTTGGTCACTGAAGCAACAATAGCCGCACCAAACAGTAGGAGCAATTCTATTATTACATAG 507 0.4181 MVSMNEMAEIVLGFDDKKTPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKWKGVLTSGLVFIVTAWCVRKKGPVYASAFNPVNLLIMAIAASLLLDETLYVGSVIGGVLIVGALYMVLWAKSKETNFIAQEFERSTEVVVMSKTLDHDLVTEATIAAPNSRSNSIIT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02300 168 Gene3D - 1 56 - -
Vivi4g02300 168 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 124 - -
Vivi4g02300 168 PANTHER WAT1-RELATED PROTEIN 53 134 IPR030184 GO:0016020|GO:0022857
Vivi4g02300 168 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 55 IPR036291 -
Vivi4g02300 168 Pfam EamA-like transporter family 54 119 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02300 Vivi-Chr4 113959827 113960884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02300 36 125 Nodulin-like Gene Family AT1G68170 50.538 8.36e-26 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02300 K10046 - vvo:131599499 322.013