Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02286 ATGAAAAAAATGATGGAAGATAAAGCTTTGGTGAGGAGGCTTTCTTCCTGTGAGACAATGGGATCAACCACAACTATTTGCAGCGATAAGACCGGAACATTGACAATGAATCAGGTGAGTGTTGTTGAGGCATGTGTTGGTGGGAAGAAGATTATATCTCCTAACGATAAATCACAGTTATCTACTATCGTCTATTCTTTGCTGATTGAATGTGCTGCACAGAACACTAATGGAAGTTTTTTTGTACCGGAGAGTGACAATGGTGTTGAGGTTTCTGGGATGACTCTAAAGAAGCGGATTCGCTACCAAGCAAAGAATAAACTATGA 327 0.4006 MKKMMEDKALVRRLSSCETMGSTTTICSDKTGTLTMNQVSVVEACVGGKKIISPNDKSQLSTIVYSLLIECAAQNTNGSFFVPESDNGVEVSGMTLKKRIRYQAKNKL 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02286 108 FunFam Phospholipid-transporting ATPase IC 24 36 - -
Vivi4g02286 108 Gene3D - 1 23 - -
Vivi4g02286 108 ProSitePatterns E1-E2 ATPases phosphorylation site. 29 35 IPR018303 -
Vivi4g02286 108 Gene3D - 24 36 IPR023214 -
Vivi4g02286 108 PANTHER CATION TRANSPORTING ATPASE 1 100 - -
Vivi4g02286 108 Gene3D - 37 50 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02286 Vivi-Chr4 113554740 113557981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02286 1 100 Primary Pumps ATPases AT5G57110 60.000 8.13e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02286 K01537 - vvo:131656086 194.897