Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02251 ATGTCTGACCACGATGCTGAGAGAAAGCAAGAGCTTCAGCTATTCACTGCACCACAACCAGAAATCGAAACACCAAACACCAATACCACCGTAGATAACAACCATCACGCATCTTCCTCCACTGCCTCTCGCCGCCCCCGGGGGCGTCCTCTTGGCTCTAGGAACAAACCTAAGATACCTGTCATAGTAACACATGACAATACTAATGTTGTAAGTTCTCATGTCCTTGAGATTAGGGTTGGAGACGACATATCAAAAAGTGTCTTTGATTACGCTCACCGTCAGGGGAGGGGCATATGCATTCTCAATGGAGATGGATTTGTGACACATGTTAGACTTCGCCTACCCACAGGAAGAGTTACAACCCTACAAGGAAGGTTTGAGATTATTTTGATATCTGGGACAGTTTTTCCAACGCCAACACCGATGAATGTTGGAGGATTGACAGTTTACTTATCAGGAATAAATGAACAAGTGATTGGGGGAAGTGTGATGCCCCCTTTGGTGGCTTCAAGTCTAGTGACTTTGACGGTTGCTTCCTTTGCAAACACTGCACCCGAAAAACTTTCTTCGGTGGTAGTTGATCGAAAAGAACATCACCTTCCATGCATCGATGGAGTTGGACAAGTGAGAGTAGGTGATCATGACTTGTCCAATGCTGGAGATTCAACATCTGGAACGAGAAACATGATGAGTAGCAACATCAGTTATCCATCATCCTCTACTCAAGATCGTGTATTTGGATGGGATGCTACTGCAACCGTAATTCCCCCACCCAAACATCCCCGTTTCTAG 795 0.4553 MSDHDAERKQELQLFTAPQPEIETPNTNTTVDNNHHASSSTASRRPRGRPLGSRNKPKIPVIVTHDNTNVVSSHVLEIRVGDDISKSVFDYAHRQGRGICILNGDGFVTHVRLRLPTGRVTTLQGRFEIILISGTVFPTPTPMNVGGLTVYLSGINEQVIGGSVMPPLVASSLVTLTVASFANTAPEKLSSVVVDRKEHHLPCIDGVGQVRVGDHDLSNAGDSTSGTRNMMSSNISYPSSSTQDRVFGWDATATVIPPPKHPRF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02251 264 MobiDBLite consensus disorder prediction 1 58 - -
Vivi4g02251 264 Gene3D - 72 200 - -
Vivi4g02251 264 MobiDBLite consensus disorder prediction 218 239 - -
Vivi4g02251 264 ProSiteProfiles PPC domain profile profile. 68 202 IPR005175 -
Vivi4g02251 264 MobiDBLite consensus disorder prediction 214 239 - -
Vivi4g02251 264 CDD DUF296 74 181 IPR005175 -
Vivi4g02251 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 199 IPR014476 GO:0003680
Vivi4g02251 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 182 IPR005175 -
Vivi4g02251 264 MobiDBLite consensus disorder prediction 17 46 - -
Vivi4g02251 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02251 Vivi-Chr4 111035340 111036134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02251 38 189 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 52.761 5.61e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02251 - - psat:127088334 469.544