Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02246 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTTTGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACCTGTGGGTCTTTCCCCTAGTGAAGCGCCAAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGTATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAGGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACCATATAAGGCTGTTCCAGCACCATCAACTGCCGAAAGGAATTTTCCACCATCCATACAGCCAATTCCATCTCAACGGAAAGCACCCACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCTAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATAAGAGGAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCAAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCACCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATCGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGCCAGGCCTCCTGTATCCACACCAATTTCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCGTGGAAGTTTTCCTCCTAAGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCCCCAGTTGCAACACCTTCTACCGATGTGCCCAAGATTTCACCATTAAGCCCTTCAACTGCTAATGGAAGTTTTCCTCCTAATTCTCACAGAGAGGGTACACCTACAAATAAAAGTCACCCTCGAGAAATAATTTCACCAGCTCCTGTATTCAATTTACCGAAATATTCGCCAGTGAATCAACCAACTGAACCTGGAAGTTTGCCTCCAACTGTCCATAAAAGAAACTCCAGTATCAGTCACACATTGGAGCCAGTTTCACAGGCCCCGGTTGCAGAACCCCCTACAAGGTTTCCAAAAAGTTCACCGGTCAGCCAACCAACGCATCATGGAAGTTTTCCACCTAATGTTCATAATAGAACTGTACATAAGGGACACATTCATACACCAGAACCAGTAATGCCACCAGTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAACATCTCCATCTGAACTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCCAGAAGCTTCAAAGGGAAGAACGGTGGAGAACCTGCTTCTGCGCCATTGTACAAAACACCGAAGTCTCCCCCAACTTCAGCTCATTCCCCTGTTCAAGCTCCTTCTGAACATAAGGCAAGGCCATCACATCATGCTCCTGAGCCACTAATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCCGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAAACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCGGGTTTCACCTGCTCCTTCTCCATCATTCAAGGTTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCGATATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGAGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATGTTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACTGATGCTCTCATTGATTTTGTACCACTTGGGGAAATATTTGACAACACTACGGCCTTTATAACTTCGGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTGCCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGAAATAATGGCAGGACAATAAAGCCTCTCGGGGTTGACATACAAAAGAAGCAACATAAAAGTGGACTTAGCAAAGGCATCATAGCTATTATTTCCCTTTCAGCTTTTCTAGCGATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAGTTCAGAGATCATTTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCTTCCGTCTCTTGCCAAAGCATCAGGTACTGCTGGGCCATCAATTGGAGGTGGAGTTACTTCAGCTTCAACATCATTTCGGTCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGGTCAAAAGTAGCAGTCAAAGTTCTAAAAAGGGAGGATCATCATGGCGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGTCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAGGAAAAAAGCCCACTTGATTGGAGTACTCGTATTAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACTGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTGCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGACCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTCGTGTGTAATGAATGCGATGAAGCAAAAGAGGCAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCTGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTTCAAAGCCATTTCACAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCCGGTCCTCTAAGAACTGTAAGAAGCAAGCGGTTATGGCAGATAATTCGAAAGCTTTCTGGCGGTACTGTTAGTGAACACGGAAATATGTTCAAGTAA 4116 0.4378 MGVVFPLILFLVKLCVLQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLPVGLSPSEAPSLLPSNGSFVQPPVVLPPSILAPTPQKIKGIESSISPSPSPSTKSLSPPYKAVPAPSTAERNFPPSIQPIPSQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPPYKAVPAPSTVERNLPPSMQPISPRVKAPIARPPVSTPISPAPSATPSGNLPVTSPISQPIVRGSFPPKVDRRNESKSHNLEPVSQAPVATPSTDVPKISPLSPSTANGSFPPNSHREGTPTNKSHPREIISPAPVFNLPKYSPVNQPTEPGSLPPTVHKRNSSISHTLEPVSQAPVAEPPTRFPKSSPVSQPTHHGSFPPNVHNRTVHKGHIHTPEPVMPPVATSPTSTFPVDPPLVHHVIPATSPSELPAPVISPSLTPSRSFKGKNGGEPASAPLYKTPKSPPTSAHSPVQAPSEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTSRRKHYAPPPMNTGFADSPFTFPIQSPVSRVSPAPSPSFKVSPHSTKIPFHPPAISPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYVCSEPYTNSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEIFDNTTAFITSERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIISLSAFLAIVLCSAAVFALFKFRDHLPESQPTSTPRGFLPSLAKASGTAGPSIGGGVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDKEKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTSSSKDDLSSDFNAASEQQSNNFQSHFTAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIRKLSGGTVSEHGNMFK 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02246 1371 Gene3D Phosphorylase Kinase; domain 1 956 1059 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 113 130 - -
Vivi4g02246 1371 FunFam Receptor-like serine/threonine-protein kinase ALE2 1060 1279 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 144 162 - -
Vivi4g02246 1371 CDD STKc_IRAK 990 1258 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 232 252 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 184 638 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 583 629 - -
Vivi4g02246 1371 Gene3D Transferase(Phosphotransferase) domain 1 1060 1283 - -
Vivi4g02246 1371 SUPERFAMILY Protein kinase-like (PK-like) 965 1257 IPR011009 -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 401 430 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 113 162 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 36 80 - -
Vivi4g02246 1371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1106 1118 IPR008271 GO:0004672|GO:0006468
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 510 524 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 45 63 - -
Vivi4g02246 1371 ProSiteProfiles Protein kinase domain profile. 984 1260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02246 1371 ProSitePatterns Protein kinases ATP-binding region signature. 990 1012 IPR017441 GO:0005524
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 684 709 - -
Vivi4g02246 1371 Pfam Protein tyrosine and serine/threonine kinase 987 1257 IPR001245 GO:0004672|GO:0006468
Vivi4g02246 1371 PANTHER OS01G0750732 PROTEIN 710 1284 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 339 379 - -
Vivi4g02246 1371 MobiDBLite consensus disorder prediction 301 320 - -
Vivi4g02246 1371 FunFam receptor-like serine/threonine-protein kinase ALE2 957 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02246 Vivi-Chr4 110959898 110969476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02246 286 1367 Receptor kinase-like Gene Family AT5G56890 51.862 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi4g02246 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02246 - - psat:127136544 2428.67