Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02245 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTTTGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACCTGTGGGTCTTTCCCCTAGTGAAGCGCCAAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGTATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAGGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACCATATAAGGCTGTTCCAGCACCATCAACTGCCGAAAGGAATTTTCCACCATCCATACAGCCAATTCCATCTCAACGGAAAGCACCCACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCTAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATAAGAGGAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCAAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCACCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATCGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGCCAGGCCTCCTGTATCCACACCAATTTCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCGTGGAAGTTTTCCTCCTAAGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCCCCAGTTGCAACACCTTCTACCGATGTGCCCAAGATTTCACCATTAAGCCCTTCAACTGCTAATGGAAGTTTTCCTCCTAATTCTCACAGAGAGGGTACACCTACAAATAAAAGTCACCCTCGAGAAATAATTTCACCAGACACAGCTCCTGTATTCAATTTACCGAAATATTCGCCAGTGAATCAACCAACTGAACCTGGAAGTTTGCCTCCAACTGTCCATAAAAGAAACTCCAGTATCAGTCACACATTGGAGCCAGTTTCACAGGCCCCGGTTGCAGAACCCCCTACAAGGTTTCCAAAAAGTTCACCGGTCAGCCAACCAACGCATCATGGAAGTTTTCCACCTAATGTTCATAATAGAACTGTACATAAGGGACACATTCATACACCAGAACCAGTAATGCCACTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAACATCTCCATCTGAACTACCAGCTCCTTCTGAACATAAGGCAAGGCCATCACATCATGCTCCTGAGCCACTAATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCCGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAAACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCGGGTTTCACCTGCTCCTTCTCCATCATTCAAGGTTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCGATATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGAGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATGTTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACTGATGCTCTCATTGATTTTGTACCACTTGGGGAAATATTTGACAACACTACGGCCTTTATAACTTCGGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTGCCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGAAATAATGGCAGGACAATAAAGCCTCTCGGGGTTGACATACAAAAGAAGCAACATAAAAGTGGACTTAGCAAAGGCATCATAGCTATTATTTCCCTTTCAGCTTTTCTAGCGATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAGTTCAGAGATCATTTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCTTCCGTCTCTTGCCAAAGCATCAGGTACTGCTGGGCCATCAATTGGAGGTGGAGTTACTTCAGCTTCAACATCATTTCGGTCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGGTCAAAAGTAGCAGTCAAAGTTCTAAAAAGGGAGGATCATCATGGCGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGTCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAGGAAAAAAGCCCACTTGATTGGAGTACTCGTATTAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACTGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTGCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGACCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTCGTGTGTAATGAATGCGATGAAGCAAAAGAGGCAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCTGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTTCAAAGCCATTTCACAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCCGGTCCTCTAAGAACTGTAAGAAGCAAGCGGTTATGGCAGATAATTCGAAAGCTTTCTGGCGGTACTGTTAGTGAACACGGAAATATGTTCAAGTAA 3990 0.4356 MGVVFPLILFLVKLCVLQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLPVGLSPSEAPSLLPSNGSFVQPPVVLPPSILAPTPQKIKGIESSISPSPSPSTKSLSPPYKAVPAPSTAERNFPPSIQPIPSQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPPYKAVPAPSTVERNLPPSMQPISPRVKAPIARPPVSTPISPAPSATPSGNLPVTSPISQPIVRGSFPPKVDRRNESKSHNLEPVSQAPVATPSTDVPKISPLSPSTANGSFPPNSHREGTPTNKSHPREIISPDTAPVFNLPKYSPVNQPTEPGSLPPTVHKRNSSISHTLEPVSQAPVAEPPTRFPKSSPVSQPTHHGSFPPNVHNRTVHKGHIHTPEPVMPLATSPTSTFPVDPPLVHHVIPATSPSELPAPSEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTSRRKHYAPPPMNTGFADSPFTFPIQSPVSRVSPAPSPSFKVSPHSTKIPFHPPAISPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYVCSEPYTNSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEIFDNTTAFITSERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIISLSAFLAIVLCSAAVFALFKFRDHLPESQPTSTPRGFLPSLAKASGTAGPSIGGGVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDKEKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTSSSKDDLSSDFNAASEQQSNNFQSHFTAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIRKLSGGTVSEHGNMFK 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02245 1329 ProSitePatterns Protein kinases ATP-binding region signature. 948 970 IPR017441 GO:0005524
Vivi4g02245 1329 Gene3D Phosphorylase Kinase; domain 1 914 1017 - -
Vivi4g02245 1329 FunFam receptor-like serine/threonine-protein kinase ALE2 915 1017 - -
Vivi4g02245 1329 FunFam Receptor-like serine/threonine-protein kinase ALE2 1018 1237 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 113 130 - -
Vivi4g02245 1329 PANTHER OS01G0750732 PROTEIN 668 1242 - -
Vivi4g02245 1329 CDD STKc_IRAK 948 1216 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 45 63 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 144 162 - -
Vivi4g02245 1329 ProSiteProfiles Protein kinase domain profile. 942 1218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02245 1329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1064 1076 IPR008271 GO:0004672|GO:0006468
Vivi4g02245 1329 Pfam Protein tyrosine and serine/threonine kinase 945 1215 IPR001245 GO:0004672|GO:0006468
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 642 667 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 232 252 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 541 587 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 339 388 - -
Vivi4g02245 1329 Gene3D Transferase(Phosphotransferase) domain 1 1018 1241 - -
Vivi4g02245 1329 SUPERFAMILY Protein kinase-like (PK-like) 923 1215 IPR011009 -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 184 591 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 401 432 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 301 320 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 113 162 - -
Vivi4g02245 1329 MobiDBLite consensus disorder prediction 36 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02245 Vivi-Chr4 110959898 110969476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02245 286 1325 Receptor kinase-like Gene Family AT5G56890 52.150 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi4g02245 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02245 - - psat:127136544 1801.95