Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02244 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTTTGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACCTGTGGGTCTTTCCCCTAGTGAAGCGCCAAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGTATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAGGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACCATATAAGGCTGTTCCAGCACCATCAACTGCCGAAAGGAATTTTCCACCATCCATACAGCCAATTCCATCTCAACGGAAAGCACCCACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCTAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATAAGAGGAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCAAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCACCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATCGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGCCAGGCCTCCTGTATCCACACCAATTTCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCGTGGAAGTTTTCCTCCTAAGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCCCCAGTTGCAACACCTTCTACCGATGTGCCCAAGATTTCACCATTAAGCCCTTCAACTGCTAATGGAAGTTTTCCTCCTAATTCTCACAGAGAGGGTACACCTACAAATAAAAGTCACCCTCGAGAAATAATTTCACCAGACACAGCTCCTGTATTCAATTTACCGAAATATTCGCCAGTGAATCAACCAACTGAACCTGGAAGTTTGCCTCCAACTGTCCATAAAAGAAACTCCAGTATCAGTCACACATTGGAGCCAGTTTCACAGGCCCCGGTTGCAGAACCCCCTACAAGGTTTCCAAAAAGTTCACCGGTCAGCCAACCAACGCATCATGGAAGTTTTCCACCTAATGTTCATAATAGAACTGTACATAAGGGACACATTCATACACCAGAACCAGTAATGCCACTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAACATCTCCATCTGAACTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCCAGAAGCTTCAAAGGGAAGAACGGTGGAGAACCTGCTTCTGCGCCATTGTACAAAACACCGAAGTCTCCCCCAACTTCAGCTCATTCCCCTGTTCAAGCTCCTTCTGAACATAAGGCAAGGCCATCACATCATGCTCCTGAGCCACTAATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCCGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAAACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCGGGTTTCACCTGCTCCTTCTCCATCATTCAAGGTTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCGATATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGAGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATGTTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACTGATGCTCTCATTGATTTTGTACCACTTGGGGAAATATTTGACAACACTACGGCCTTTATAACTTCGGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTGCCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGAAATAATGGCAGGACAATAAAGCCTCTCGGGGTTGACATACAAAAGAAGCAACATAAAAGTGGACTTAGCAAAGGCATCATAGCTATTATTTCCCTTTCAGCTTTTCTAGCGATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAGTTCAGAGATCATTTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCTTCCGTCTCTTGCCAAAGCATCAGGTACTGCTGGGCCATCAATTGGAGGTGGAGTTACTTCAGCTTCAACATCATTTCGGTCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGGTCAAAAGTAGCAGTCAAAGTTCTAAAAAGGGAGGATCATCATGGCGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGTCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAGGAAAAAAGCCCACTTGATTGGAGTACTCGTATTAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACTGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTGCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGACCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTCGTGTGTAATGAATGCGATGAAGCAAAAGAGGCAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCTGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTTCAAAGCCATTTCACAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCCGGTCCTCTAAGAACTGTAAGAAGCAAGCGGTTATGGCAGATAATTCGAAAGCTTTCTGGCGGTACTGTTAGTGAACACGGAAATATGTTCAAGTAA 4119 0.4377 MGVVFPLILFLVKLCVLQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLPVGLSPSEAPSLLPSNGSFVQPPVVLPPSILAPTPQKIKGIESSISPSPSPSTKSLSPPYKAVPAPSTAERNFPPSIQPIPSQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPPYKAVPAPSTVERNLPPSMQPISPRVKAPIARPPVSTPISPAPSATPSGNLPVTSPISQPIVRGSFPPKVDRRNESKSHNLEPVSQAPVATPSTDVPKISPLSPSTANGSFPPNSHREGTPTNKSHPREIISPDTAPVFNLPKYSPVNQPTEPGSLPPTVHKRNSSISHTLEPVSQAPVAEPPTRFPKSSPVSQPTHHGSFPPNVHNRTVHKGHIHTPEPVMPLATSPTSTFPVDPPLVHHVIPATSPSELPAPVISPSLTPSRSFKGKNGGEPASAPLYKTPKSPPTSAHSPVQAPSEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTSRRKHYAPPPMNTGFADSPFTFPIQSPVSRVSPAPSPSFKVSPHSTKIPFHPPAISPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYVCSEPYTNSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEIFDNTTAFITSERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIISLSAFLAIVLCSAAVFALFKFRDHLPESQPTSTPRGFLPSLAKASGTAGPSIGGGVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDKEKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTSSSKDDLSSDFNAASEQQSNNFQSHFTAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIRKLSGGTVSEHGNMFK 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02244 1372 FunFam Receptor-like serine/threonine-protein kinase ALE2 1061 1280 - -
Vivi4g02244 1372 Gene3D Transferase(Phosphotransferase) domain 1 1061 1284 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 113 130 - -
Vivi4g02244 1372 ProSitePatterns Protein kinases ATP-binding region signature. 991 1013 IPR017441 GO:0005524
Vivi4g02244 1372 Gene3D Phosphorylase Kinase; domain 1 957 1060 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 144 162 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 685 710 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 232 252 - -
Vivi4g02244 1372 SUPERFAMILY Protein kinase-like (PK-like) 966 1258 IPR011009 -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 184 638 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 584 630 - -
Vivi4g02244 1372 ProSiteProfiles Protein kinase domain profile. 985 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02244 1372 Pfam Protein tyrosine and serine/threonine kinase 988 1258 IPR001245 GO:0004672|GO:0006468
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 113 162 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 36 80 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 511 525 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 45 63 - -
Vivi4g02244 1372 PANTHER OS01G0750732 PROTEIN 711 1285 - -
Vivi4g02244 1372 CDD STKc_IRAK 991 1259 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 339 388 - -
Vivi4g02244 1372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1107 1119 IPR008271 GO:0004672|GO:0006468
Vivi4g02244 1372 FunFam receptor-like serine/threonine-protein kinase ALE2 958 1060 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 301 320 - -
Vivi4g02244 1372 MobiDBLite consensus disorder prediction 401 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02244 Vivi-Chr4 110959898 110969476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02244 286 1368 Receptor kinase-like Gene Family AT5G56890 51.169 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi4g02244 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02244 - - psat:127136544 2415.19