Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02243 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTTTGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACCTGTGGGTCTTTCCCCTAGTGAAGCGCCAAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGTATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAGGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACCATATAAGGCTGTTCCAGCACCATCAACTGCCGAAAGGAATTTTCCACCATCCATACAGCCAATTCCATCTCAACGGAAAGCACCCACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCTAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATAAGAGGAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCAAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCACCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATCGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGCCAGGCCTCCTGTATCCACACCAATTTCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCGTGGAAGTTTTCCTCCTAAGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCCCCAGTTGCAACACCTTCTACCGATGTGCCCAAGATTTCACCATTAAGCCCTTCAACTGCTAATGGAAGTTTTCCTCCTAATTCTCACAGAGAGGGTACACCTACAAATAAAAGTCACCCTCGAGAAATAATTTCACCAGACACAGCTCCTGTATTCAATTTACCGAAATATTCGCCAGTGAATCAACCAACTGAACCTGGAAGTTTGCCTCCAACTGTCCATAAAAGAAACTCCAGTATCAGTCACACATTGGAGCCAGTTTCACAGGCCCCGGTTGCAGAACCCCCTACAAGGTTTCCAAAAAGTTCACCGGTCAGCCAACCAACGCATCATGGAAGTTTTCCACCTAATGTTCATAATAGAACTGTACATAAGGGACACATTCATACACCAGAACCAGTAATGCCACCAGTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAACATCTCCATCTGAACTACCAGCTCCTTCTGAACATAAGGCAAGGCCATCACATCATGCTCCTGAGCCACTAATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCCGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAAACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCGGGTTTCACCTGCTCCTTCTCCATCATTCAAGGTTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCGATATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGAGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATGTTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACTGATGCTCTCATTGATTTTGTACCACTTGGGGAAATATTTGACAACACTACGGCCTTTATAACTTCGGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTGCCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGAAATAATGGCAGGACAATAAAGCCTCTCGGGGTTGACATACAAAAGAAGCAACATAAAAGTGGACTTAGCAAAGGCATCATAGCTATTATTTCCCTTTCAGCTTTTCTAGCGATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAGTTCAGAGATCATTTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCTTCCGTCTCTTGCCAAAGCATCAGGTACTGCTGGGCCATCAATTGGAGGTGGAGTTACTTCAGCTTCAACATCATTTCGGTCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGGTCAAAAGTAGCAGTCAAAGTTCTAAAAAGGGAGGATCATCATGGCGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGTCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAGGAAAAAAGCCCACTTGATTGGAGTACTCGTATTAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACTGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTGCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGACCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTCGTGTGTAATGAATGCGATGAAGCAAAAGAGGCAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCTGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTTCAAAGCCATTTCACAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCCGGTCCTCTAAGAACTGTAAGAAGCAAGCGGTTATGGCAGATAATTCGAAAGCTTTCTGGCGGTACTGTTAGTGAACACGGAAATATGTTCAAGTAA 3993 0.4358 MGVVFPLILFLVKLCVLQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLPVGLSPSEAPSLLPSNGSFVQPPVVLPPSILAPTPQKIKGIESSISPSPSPSTKSLSPPYKAVPAPSTAERNFPPSIQPIPSQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPPYKAVPAPSTVERNLPPSMQPISPRVKAPIARPPVSTPISPAPSATPSGNLPVTSPISQPIVRGSFPPKVDRRNESKSHNLEPVSQAPVATPSTDVPKISPLSPSTANGSFPPNSHREGTPTNKSHPREIISPDTAPVFNLPKYSPVNQPTEPGSLPPTVHKRNSSISHTLEPVSQAPVAEPPTRFPKSSPVSQPTHHGSFPPNVHNRTVHKGHIHTPEPVMPPVATSPTSTFPVDPPLVHHVIPATSPSELPAPSEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTSRRKHYAPPPMNTGFADSPFTFPIQSPVSRVSPAPSPSFKVSPHSTKIPFHPPAISPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYVCSEPYTNSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEIFDNTTAFITSERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIISLSAFLAIVLCSAAVFALFKFRDHLPESQPTSTPRGFLPSLAKASGTAGPSIGGGVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDKEKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTSSSKDDLSSDFNAASEQQSNNFQSHFTAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIRKLSGGTVSEHGNMFK 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02243 1330 SUPERFAMILY Protein kinase-like (PK-like) 924 1216 IPR011009 -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 113 130 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 45 63 - -
Vivi4g02243 1330 Gene3D Transferase(Phosphotransferase) domain 1 1019 1242 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 144 162 - -
Vivi4g02243 1330 PANTHER OS01G0750732 PROTEIN 669 1243 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 232 252 - -
Vivi4g02243 1330 CDD STKc_IRAK 949 1217 - -
Vivi4g02243 1330 ProSitePatterns Protein kinases ATP-binding region signature. 949 971 IPR017441 GO:0005524
Vivi4g02243 1330 FunFam receptor-like serine/threonine-protein kinase ALE2 916 1018 - -
Vivi4g02243 1330 ProSiteProfiles Protein kinase domain profile. 943 1219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02243 1330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1065 1077 IPR008271 GO:0004672|GO:0006468
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 339 388 - -
Vivi4g02243 1330 FunFam Receptor-like serine/threonine-protein kinase ALE2 1019 1238 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 644 668 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 184 596 - -
Vivi4g02243 1330 Pfam Protein tyrosine and serine/threonine kinase 946 1216 IPR001245 GO:0004672|GO:0006468
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 301 320 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 401 432 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 113 162 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 542 588 - -
Vivi4g02243 1330 MobiDBLite consensus disorder prediction 36 80 - -
Vivi4g02243 1330 Gene3D Phosphorylase Kinase; domain 1 915 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02243 Vivi-Chr4 110959898 110969476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02243 286 1326 Receptor kinase-like Gene Family AT5G56890 51.339 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi4g02243 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02243 - - psat:127136544 1804.65