Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02242 ATGGGTGTGGTTTTTCCATTGATTCTGTTTCTGGTGAAGCTTTGTGTTTTGCAAGGATCTGAAGGGTCTGTTATATCCCCATCTCCAGCATTTCTTCCTTCTGTTCATCATAATGGAGAAGCACCTGGTCCTATCCATAATGGACAGTCATGGCAAAGCAATGCATCAAGCCCTTTTGATCCACATGGGTCTGTTATATCGCCGTCTCCAGCAACATTACCTGTGGGTCTTTCCCCTAGTGAAGCGCCAAGTCTTTTACCCTCAAATGGGTCTTTTGTACAACCTCCAGTTGTATTACCACCGTCTATATTAGCGCCAACTCCTCAGAAGATTAAGGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAGCACCAAATCTTTATCTCCACCATATAAGGCTGTTCCAGCACCATCAACTGCCGAAAGGAATTTTCCACCATCCATACAGCCAATTCCATCTCAACGGAAAGCACCCACTGTTAGTCCTCCTATATCTACACCAATTGCTCCAGCTCTTGTTGCAATACCTCCTGAAATTTTGCCTAAAACTTCACCTATCAGTCAACCAATTGAACATGGAAGTTTGCCTCCTAAGATTGATAAGAGGAATGAAAGCAAGAGTCACAATTTAGAGCCAGTTTCACCAGGTTCTTTCTTGCAACCTCCAGTTGCGTTACCACCTAATACATCAGCTCCAACTTCTCCAAAGATTAAAGGAATTGAATCATCCATATCACCTAGTCCTAGTCCAAACATCAAATCGTTATCGCCACCATATAAGGCTGTTCCTGCACCATCAACTGTTGAAAGGAATTTGCCACCATCGATGCAACCAATTTCACCTCGAGTGAAAGCACCTATTGCCAGGCCTCCTGTATCCACACCAATTTCTCCAGCTCCTTCTGCAACACCTTCTGGAAATTTGCCTGTTACTTCACCTATCAGCCAACCAATTGTGCGTGGAAGTTTTCCTCCTAAGGTTGATAGGAGGAATGAAAGTAAGAGTCACAACCTAGAGCCAGTTTCACAAGCCCCAGTTGCAACACCTTCTACCGATGTGCCCAAGATTTCACCATTAAGCCCTTCAACTGCTAATGGAAGTTTTCCTCCTAATTCTCACAGAGAGGGTACACCTACAAATAAAAGTCACCCTCGAGAAATAATTTCACCAGACACAGCTCCTGTATTCAATTTACCGAAATATTCGCCAGTGAATCAACCAACTGAACCTGGAAGTTTGCCTCCAACTGTCCATAAAAGAAACTCCAGTATCAGTCACACATTGGAGCCAGTTTCACAGGCCCCGGTTGCAGAACCCCCTACAAGGTTTCCAAAAAGTTCACCGGTCAGCCAACCAACGCATCATGGAAGTTTTCCACCTAATGTTCATAATAGAACTGTACATAAGGGACACATTCATACACCAGAACCAGTAATGCCACCAGTAGCTACATCACCAACAAGTACATTTCCAGTAGATCCACCATTGGTCCACCATGTCATACCTGCAACATCTCCATCTGAACTACCAGCACCTGTCATCTCTCCCTCATTAACACCTTCCAGAAGCTTCAAAGGGAAGAACGGTGGAGAACCTGCTTCTGCGCCATTGTACAAAACACCGAAGTCTCCCCCAACTTCAGCTCATTCCCCTGTTCAAGCTCCTTCTGAACATAAGGCAAGGCCATCACATCATGCTCCTGAGCCACTAATTTCACCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCACCTTCACCTTCTACCGCCGTTTATAAGCATCAGCCTACACGGAACACGATAACCAGTCCAGCTCCTGCATCATCATATTTTGTTTCTCCTCCCACTTCAAAACACCAAGATCAACCAATTCCTCCCTCATTTCTTCCAACAAGTAGACGGAAACATTATGCTCCACCACCAATGAACACAGGTTTTGCAGATTCTCCATTTACCTTTCCTATTCAATCACCAGTGAGCCGGGTTTCACCTGCTCCTTCTCCATCATTCAAGGTTTCCCCTCATTCAACCAAAATTCCATTTCATCCTCCTGCGATATCTCCTTCACGGCCTTTTTCGAAGAGCCCTAAGAAGCCAGTATTGCCTCGAGTTCAAGCATTACCACCCCCACCTCCCAATGAAGATTGTATATCATATGTTTGCTCGGAGCCTTATACGAATTCTCCACCCGGGGTGCCCTGCATGTGTGTCTGGCCAATGAGAGTTGGCCTTCGCCTCAGTGTTCCTCTGTATACCTTCTTCCCTTTGGTTTCGGAGCTTGCTTCTGAACTAGCCAGCGGGGTTTTCATGAAACAAAGTCAAGTTCGAATTATGGGGGCCAACGCAGCAACTGAGCAGCCAGATAAAACTGATGCTCTCATTGATTTTGTACCACTTGGGGAAATATTTGACAACACTACGGCCTTTATAACTTCGGAGAGGTTTTGGCATAAACAAGTTGTTATAAAAGCTTCTTACTTTGGAGATTATGAAGTGTTATATATAAGCTATCCAGGTTTGCCTCCATCTCCTCCATTACCACCTTCAAGCGTTAACATGATAGATGGTGGTCCATATTCAAATAATGGAAATAATGGCAGGACAATAAAGCCTCTCGGGGTTGACATACAAAAGAAGCAACATAAAAGTGGACTTAGCAAAGGCATCATAGCTATTATTTCCCTTTCAGCTTTTCTAGCGATTGTTTTATGCTCTGCTGCTGTTTTCGCCTTATTCAAGTTCAGAGATCATTTGCCTGAATCTCAACCAACATCAACCCCACGGGGTTTTCTTCCGTCTCTTGCCAAAGCATCAGGTACTGCTGGGCCATCAATTGGAGGTGGAGTTACTTCAGCTTCAACATCATTTCGGTCTAGCATTGCTGCTTACGCAGGATCTGCTAAGACTTTCAGTATGAACGAAATAGAGAAAGCAACTGATAATTTTCACCCTTCTAGAATACTTGGAGAAGGAGGTTTTGGTCTTGTTTATAGATGTGACCTTGAAGATGGGTCAAAAGTAGCAGTCAAAGTTCTAAAAAGGGAGGATCATCATGGCGATCGTGAATTCTTATCTGAAGTTGAAATGCTTAGTCGCCTTCACCATAGAAATTTGGTAAAGCTGATTGGTATATGTACAGAACTCACCTCCCGCTGTCTGGTTTACGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAAGGAAAAAAGCCCACTTGATTGGAGTACTCGTATTAAGATAGCACTTGGTGCTGCTCGTGGTCTTGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGATTTCAAATCTAGCAATATATTGCTGGAAAATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACGGCAGCTGATGAGGATAACAGGCACATATCTACACGTGTCATGGGAACTTTCGGATATGTGGCTCCCGAGTACGCAATGACTGGGCATCTTCTCGTGAAGAGTGACGTATACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTGGACTTTTCACAACCGCCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCCTTCTAACAAGTAGAGAAGGACTTGAAGCAATAATCGATCCATCTCTAGGAACCAATGTGCCTTTTGATAGTGTGGCTAAAGTTGCGGCCATCGCTTCAATGTGTGTACAACCAGAGGTTTCAGATCGACCTTTCATGGGCGAGGTTGTTCAGGCTTTGAAACTCGTGTGTAATGAATGCGATGAAGCAAAAGAGGCAGGTTCAACAAGTTCTAGCAAAGACGATTTATCTTCTGATTTCAATGCTGCTTCTGAACAACAATCCAATAATTTTCAAAGCCATTTCACAGCGGGTAACTATGACTTCGGAGTTGATATCGAAAACGGATTGTCAGCATCAGAGATATTCAGCTCGTCAGCAAGATTTGGAAGGCAAGTATCTGGATCATTTAGAAGACATTCATATTCCGGTCCTCTAAGAACTGTAAGAAGCAAGCGGTTATGGCAGATAATTCGAAAGCTTTCTGGCGGTACTGTTAGTGAACACGGAAATATGTTCAAGTAA 4122 0.4379 MGVVFPLILFLVKLCVLQGSEGSVISPSPAFLPSVHHNGEAPGPIHNGQSWQSNASSPFDPHGSVISPSPATLPVGLSPSEAPSLLPSNGSFVQPPVVLPPSILAPTPQKIKGIESSISPSPSPSTKSLSPPYKAVPAPSTAERNFPPSIQPIPSQRKAPTVSPPISTPIAPALVAIPPEILPKTSPISQPIEHGSLPPKIDKRNESKSHNLEPVSPGSFLQPPVALPPNTSAPTSPKIKGIESSISPSPSPNIKSLSPPYKAVPAPSTVERNLPPSMQPISPRVKAPIARPPVSTPISPAPSATPSGNLPVTSPISQPIVRGSFPPKVDRRNESKSHNLEPVSQAPVATPSTDVPKISPLSPSTANGSFPPNSHREGTPTNKSHPREIISPDTAPVFNLPKYSPVNQPTEPGSLPPTVHKRNSSISHTLEPVSQAPVAEPPTRFPKSSPVSQPTHHGSFPPNVHNRTVHKGHIHTPEPVMPPVATSPTSTFPVDPPLVHHVIPATSPSELPAPVISPSLTPSRSFKGKNGGEPASAPLYKTPKSPPTSAHSPVQAPSEHKARPSHHAPEPLISPPKSPFNKEDHSPAPSPSTAVYKHQPTRNTITSPAPASSYFVSPPTSKHQDQPIPPSFLPTSRRKHYAPPPMNTGFADSPFTFPIQSPVSRVSPAPSPSFKVSPHSTKIPFHPPAISPSRPFSKSPKKPVLPRVQALPPPPPNEDCISYVCSEPYTNSPPGVPCMCVWPMRVGLRLSVPLYTFFPLVSELASELASGVFMKQSQVRIMGANAATEQPDKTDALIDFVPLGEIFDNTTAFITSERFWHKQVVIKASYFGDYEVLYISYPGLPPSPPLPPSSVNMIDGGPYSNNGNNGRTIKPLGVDIQKKQHKSGLSKGIIAIISLSAFLAIVLCSAAVFALFKFRDHLPESQPTSTPRGFLPSLAKASGTAGPSIGGGVTSASTSFRSSIAAYAGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYRCDLEDGSKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTELTSRCLVYELIPNGSVESHLHGVDKEKSPLDWSTRIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLENDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWARPLLTSREGLEAIIDPSLGTNVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSTSSSKDDLSSDFNAASEQQSNNFQSHFTAGNYDFGVDIENGLSASEIFSSSARFGRQVSGSFRRHSYSGPLRTVRSKRLWQIIRKLSGGTVSEHGNMFK 1373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02242 1373 Pfam Protein tyrosine and serine/threonine kinase 989 1259 IPR001245 GO:0004672|GO:0006468
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 687 711 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 113 130 - -
Vivi4g02242 1373 PANTHER OS01G0750732 PROTEIN 712 1286 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 144 162 - -
Vivi4g02242 1373 FunFam receptor-like serine/threonine-protein kinase ALE2 959 1061 - -
Vivi4g02242 1373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1108 1120 IPR008271 GO:0004672|GO:0006468
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 232 252 - -
Vivi4g02242 1373 SUPERFAMILY Protein kinase-like (PK-like) 967 1259 IPR011009 -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 184 643 - -
Vivi4g02242 1373 Gene3D Phosphorylase Kinase; domain 1 958 1061 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 113 162 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 36 80 - -
Vivi4g02242 1373 CDD STKc_IRAK 992 1260 - -
Vivi4g02242 1373 ProSiteProfiles Protein kinase domain profile. 986 1262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 45 63 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 585 631 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 512 526 - -
Vivi4g02242 1373 Gene3D Transferase(Phosphotransferase) domain 1 1062 1285 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 339 388 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 301 320 - -
Vivi4g02242 1373 MobiDBLite consensus disorder prediction 401 432 - -
Vivi4g02242 1373 ProSitePatterns Protein kinases ATP-binding region signature. 992 1014 IPR017441 GO:0005524
Vivi4g02242 1373 FunFam Receptor-like serine/threonine-protein kinase ALE2 1062 1281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02242 Vivi-Chr4 110959898 110969476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02242 286 1369 Receptor kinase-like Gene Family AT5G56890 51.677 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi4g02242 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02242 - - psat:127136544 2423.66