Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02241 ATGTCAAGGGCTGCCATACTTATCAAGGATTTGGTGAAAGGCAATCAAGTCTGGAAGATGCAAATAAGGGTTGTTGATTTGTGGGTTGTTAAGGAGAAAACAGGGCAACAACACCTTGAGTGTGTCATTCAGGATGTAAAGGGTGATCAGATTCACGTAATCACGAGAAGCCGAGACTTCAAAGAGTGGATTGATCAAGTCAAAGAAAATGAAACATATTCTCTTTACAATGGAGAGCCGGTTGTTAATGATGGACCCTTCAAAGTTTGTGCAAACCCACTCAAACTTCTATTCAATGGAGGGACTACCGTGACAAATGTGGCGTTTCCCGAAATACCGCTTCACAAATACAACTTTCAACCTATCGAAAACTTTCTCAAAGGAAGCATCAAGCATGATATGTTATACGATGTCATAGGTGTTTTACAGGATGTGCTTCGGACGCAAGTGGGAGGAGGTGGTAGGAAGTCCTGCGCTAATATCACTTTGCGTGATATCGAAGGAAATGTTATAGAGGTTGTCTTATGGGGTGATTACTGCAAGCAATTCTTGAGCTACAATACCCCTGGAAAAATGGCTGGCCCTACTATTATCATCTTGACACATGCGTGGTGCAAGCCAAACACAGGTTTAATCAAATATTTGTCTAAACGCTTTGGAGAAAATGAATTATCCAATGCTCCTGATCTTTCCCTGTCCTTAACCTTTGATTCATCCCTTCAATCCTCTAACAAGAATTGGAAGAGCCTCGACGAGGTCAAAAGCATCCGTGATATCGCTGCGTTAGGAAAGGATTCTTTCGCAACCACTATTGGTACTACCAAATATTTCAAAGCTTCAAAGTTTGGTCTTCCGTATCAAGTATCAATCTGGTTTCGATCAATTCTCTATTGTAGCAATACTTAA 906 0.4106 MSRAAILIKDLVKGNQVWKMQIRVVDLWVVKEKTGQQHLECVIQDVKGDQIHVITRSRDFKEWIDQVKENETYSLYNGEPVVNDGPFKVCANPLKLLFNGGTTVTNVAFPEIPLHKYNFQPIENFLKGSIKHDMLYDVIGVLQDVLRTQVGGGGRKSCANITLRDIEGNVIEVVLWGDYCKQFLSYNTPGKMAGPTIIILTHAWCKPNTGLIKYLSKRFGENELSNAPDLSLSLTFDSSLQSSNKNWKSLDEVKSIRDIAALGKDSFATTIGTTKYFKASKFGLPYQVSIWFRSILYCSNT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02241 301 SUPERFAMILY Nucleic acid-binding proteins 117 210 IPR012340 -
Vivi4g02241 301 Gene3D - 111 254 IPR012340 -
Vivi4g02241 301 Pfam Domain of unknown function DUF223 40 135 IPR003871 -
Vivi4g02241 301 SUPERFAMILY Nucleic acid-binding proteins 7 105 IPR012340 -
Vivi4g02241 301 CDD RPA1_DBD_A_like 19 104 - -
Vivi4g02241 301 Gene3D - 5 108 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02241 Vivi-Chr4 110894271 110896308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02241 18 180 Core DNA Replication Machinery Family AT4G19130 21.512 1.12e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02241 - - vvo:131604240 499.975