Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02152 ATGGAAGCTGATCGGATTCAACAATTGCAGAATGAAGGACTAATTAGTTGCTACTGGAACCGTGTCGATAACCCTGGCACCATATGGAACTCAGAAAATGTCTTGATACATTACCTTCCAAATCTAGTCCTCCAAATATTACTCGTTGTTTTCGCAACTCGTATAATGTTTTGGATCCTTAGACCCTTACATCAACCTCATTTTGTTGCTGAGCTTCTTGCCGGATTCGTGCTAAATATATATGTTCCCATACTGAACTCATCACTGTTTGGAATAGCACTTCCTATAAAGGGACTTCTTGTTTTTGAGTCTATAGCACAATTGGGTATCATCTACTATGTTTTTGTAACTGGTTTAGAGATGAACTTAGAGACAGTATCAAGAGCAAGAAAAAAAGCATCAACTATTGCTATTGCAGGAACATTAATTCCAATGATATTAGGGTTTATGATATATGTTTTAGTTGAAAAAACATACATAAAAAACGGCGAATTCAACACCGTTTCGGCTTATTTTCTATGGTCGTTAACTATTAGTATAACAAGTTTTCCAGTGGTGGCACATGTTCTTTCAGATCTTAAGATTCTCTATACAGGACTTGGTAGAGTTGCATTAACAGCTGCTACAATCAATGACTTTATCAATTGGGCAATGTTTATATTTCTTATTCCGTTAATTATTAACGGTAAAAGAGGAATATTATCGGTGATATCAACGATACTTTTCGTTCTTTTTTGTCATTGTGTATTAGCTCCTCCACTCAACAAAATCTTAATACGAAAAACTAATGAAAATGAATGGGACTTATATCAACTATCCTATGTGATAATTGGACTTGTTGCATGTGCAACCGTTACTGAATTTCTTGGTACACATTCTGTTGTTGGAGCATTGGTTTTTGGGTTGATTCTTCCGCGTGGAAAATTTTCGGAAATGTTGATAGAACAATCGGATGATATTGGATCGGGATATTTAGCACCGTTGTTTTTCGCGAGTATTGGTGTGAGAAGTGAAGTGCTTCCAGTTATAAAGGGAAACTTTATTTTGGTTATTTTTGTCATGATAGTGTTGATTTCAAGTAAGATTCTGAGTACTATAGTTGCTACTCGTTTCTATGGAATGCCGATTCGTGATAGTGTGGCTCTTGGAATGCTTATGAATACTAAAGGGGTCTTATCATTGATTATACTCAACATTGGATGGGATAGAAAGGTTATTAGCCATGAGGCCTTTACAATTATGGTTTTTAGCATATTTTTCATGACAGTTATAGTGGCACCTATTATCAATGCAATGTACAAACCAAGAGTGACATATGAACAAAACAAGTTAAGGACAATAGAGAATTTGAAAAGTGATTCTGAGATTAGAGTTATGGTTTGTGTGCATAATGCTCGCCAAGCGAATGGAATGGTCAATATTCTTGAGGCTTGTAATGGCGTAAATGTTTCTCATTTACGCGTCTTTGCGCTTCAACTTGTTGAACTCAAAGGACGTTCGGCTGCACTAATGGTAGCGCAACTAGACCAACAACAACAACAAAAGGAATCACAAATCCTCGATCAATCGTCAGAGACGAATAGTTACTCGTCCAACATTATCACGAATGTTTTTGAAGAATATTCGACTAATAATGCTAACACTCTTGTGGAAAATCTTGTTGCTATGTCTTCTTATTCGACGATTCATAAAGACATATTTAATTTAGCGTTGGAGAAACAGGCGTCGTTGGTTTTAATCCCGTTTCATAAGCAAAGCACCGTGGAAGGTTCTCTAGAGGTGACCGAGAGCGCGGTGAAAGACATAAACCGAAACTTGATGCAAGACGTGCCTTGTTCGGTTGGAATTTTCGTTGATCGTGGACATCATGCAGCGTTGTCCAAGATCAAAATGCATATTACTATGATTTTCATTGGTGGACCTGACGACAGAGAAGCCTTAGCGATTGCTTGGAGAATGTCGAAGCATCCGTGGACACGGCTTACAATGGTGAGGATATTTTTAAGTGGTAAGGCGGGAAAAGTTGATTCGTCGAGATATAATGAAGCACAAGGACTATTAGCTGCGGTTTTAGATACCGGGAAGCAAAAAGAGTTGGACGAAGAATACGTAGATTCGTTTCGGCTTAAAGCGGTTAACAATGAAGATTCTATAACTTATACTGAAAGAGAAGTGCAAGCAGGTGAAGATATTCCAGAATTGCTTAATGAGTTGGATAAAGTAGGTTGTGATTTATACATTTTAGGACATGGAAAAGGAAGAAACTCTTCGGTTTGGTCGAATTTGTTGGAATGGGCTGATTGTCCTGAGCTTGGTGTTATTGGTGATATGTTGGCATCAAATAGTTTTGGTTCAAATTCTTCAATACTTGTTGTACAACAATATGGATTTGGAGGTTTAGAATTCAATACTTGTCATTGTTCTCGCAAAGCACGTTCAAAGAATGATGATCTTGAGTCAGTTTCCCAAAGATATAATGACTAG 2484 0.3736 MEADRIQQLQNEGLISCYWNRVDNPGTIWNSENVLIHYLPNLVLQILLVVFATRIMFWILRPLHQPHFVAELLAGFVLNIYVPILNSSLFGIALPIKGLLVFESIAQLGIIYYVFVTGLEMNLETVSRARKKASTIAIAGTLIPMILGFMIYVLVEKTYIKNGEFNTVSAYFLWSLTISITSFPVVAHVLSDLKILYTGLGRVALTAATINDFINWAMFIFLIPLIINGKRGILSVISTILFVLFCHCVLAPPLNKILIRKTNENEWDLYQLSYVIIGLVACATVTEFLGTHSVVGALVFGLILPRGKFSEMLIEQSDDIGSGYLAPLFFASIGVRSEVLPVIKGNFILVIFVMIVLISSKILSTIVATRFYGMPIRDSVALGMLMNTKGVLSLIILNIGWDRKVISHEAFTIMVFSIFFMTVIVAPIINAMYKPRVTYEQNKLRTIENLKSDSEIRVMVCVHNARQANGMVNILEACNGVNVSHLRVFALQLVELKGRSAALMVAQLDQQQQQKESQILDQSSETNSYSSNIITNVFEEYSTNNANTLVENLVAMSSYSTIHKDIFNLALEKQASLVLIPFHKQSTVEGSLEVTESAVKDINRNLMQDVPCSVGIFVDRGHHAALSKIKMHITMIFIGGPDDREALAIAWRMSKHPWTRLTMVRIFLSGKAGKVDSSRYNEAQGLLAAVLDTGKQKELDEEYVDSFRLKAVNNEDSITYTEREVQAGEDIPELLNELDKVGCDLYILGHGKGRNSSVWSNLLEWADCPELGVIGDMLASNSFGSNSSILVVQQYGFGGLEFNTCHCSRKARSKNDDLESVSQRYND 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02152 827 Pfam Sodium/hydrogen exchanger family 47 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi4g02152 827 Gene3D - 40 441 IPR038770 -
Vivi4g02152 827 PANTHER CATION/H + ANTIPORTER 22 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02152 Vivi-Chr4 105929195 105932311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02152 7 795 Antiporter Super Family AT2G13620 36.546 5.54e-175 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02152 - - mtr:11442852 1156.35