Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02148 ATGGAGAAACACATGGTGAAGGAAGAAATAGTTGAGGTCGTAAATAGAGAAGGAGAGGAACAAGAACAACAACAACAACAACATGAGGGGGGTGCCATTGCTGGTGGTGAAGAGGATGAGGCTGTTTCCACCATAACTATGGAAAGGGTTGCTGCTGCTAAGAAATTCATTGAGAATCATTATAGGTCTCAGATGAAACACATCCAAGAACGCAAGGAAAGGCGTTCGGAGCTGCAAAAGGAGTTAGAATCGTCGCGTGTACCGGAAGAGGAACAGATCAATTTACTGAAGGATTTAGAGAGCAAGGAGACTGAGTATATGAGGTTGAAAAGACATAAAATATGTGTTGATGATTTTGATCTTTTAACCATTATTGGCAGGGGAGCCTTTGGTGAGGTAAGACTCTGTCGCGAGAAGAAATCGGGTATTATATATGCGATGAAAAAGTTGAAAAAATCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCTGAAGTTGTCAATGACTTCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATACTTACCTGGTGGCGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAGAAAGTGTGGCTCGATTTTACATCGCCCAAACCGTTTTGGCCATAGAGTCTATTCATAAACACAATTACATTCATCGGGATATAAAACCTGACAACCTTCTGTTAGACAAATTCGGTCACATGAAACTGTCGGATTTCGGTCTTTGCAAACCACTTGACTGCTCAAATCTATCATCTATAAATGAAAATGAAATATTGGACGATGATAACTTGAATGATACAATGGACGTTGATGGAAGTTGCCCAAATAACAGAAATGGTAGGCGTTGGAAAAGTCCGCTCGAGCAACTTCAACATTGGCAAATGAATAGGAGGAAGTTGGCCTTTTCTACTGTTGGAACTCCCGACTATATTGCTCCGGAAGTGTTATTGAAAAAGGGTTATGGTGTGGAGTGTGACTGGTGGTCTCTCGGGGCTATTATGTATGAGATGCTCGTCGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCCGAAAGATTGTGCACTGGAAAAATCACTTAAAATTTCCGGACGAGGCGAGACTGACGCCTGAAGCAAAAGATCTGATATGCAAGTTGCTTTGTGGTGTTCCGCATAGGCTTGGCACCAGAGGAGCAACTGAAATTAAAGCTCATCCTTGGTTCAGAGATATCTTATGGAACAGGCTGTATGGAAACGAGGCAGCATTTAAACCGCGAGTCATTGGGGAGCTTGACACTCAGAATTTTATGAAATTCGATGAGGTTGAACCGCCAAAGTCAGCTCGAGCAGGATCCGGACCCAGAAAGACGCTCCTAACTACTCAAGATCTCAGTTTCGTTGGCTATACATATAAGAATTTTGCCGCTGTCAAGGGGAAGCGTCATTCTAACGAAAAGGAAAGCCTGTCGCCACGGTCATCAATCGACTCCACACACAGTAATCAAACCTAG 1566 0.4215 MEKHMVKEEIVEVVNREGEEQEQQQQQHEGGAIAGGEEDEAVSTITMERVAAAKKFIENHYRSQMKHIQERKERRSELQKELESSRVPEEEQINLLKDLESKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGIIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVVNDFIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKFGHMKLSDFGLCKPLDCSNLSSINENEILDDDNLNDTMDVDGSCPNNRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPDEARLTPEAKDLICKLLCGVPHRLGTRGATEIKAHPWFRDILWNRLYGNEAAFKPRVIGELDTQNFMKFDEVEPPKSARAGSGPRKTLLTTQDLSFVGYTYKNFAAVKGKRHSNEKESLSPRSSIDSTHSNQT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02148 521 Pfam Protein kinase C terminal domain 447 489 IPR017892 GO:0004674|GO:0005524|GO:0006468
Vivi4g02148 521 Gene3D Phosphorylase Kinase; domain 1 117 198 - -
Vivi4g02148 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 474 - -
Vivi4g02148 521 MobiDBLite consensus disorder prediction 496 521 - -
Vivi4g02148 521 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Vivi4g02148 521 Gene3D Transferase(Phosphotransferase) domain 1 325 444 - -
Vivi4g02148 521 FunFam Non-specific serine/threonine protein kinase 80 202 - -
Vivi4g02148 521 MobiDBLite consensus disorder prediction 1 41 - -
Vivi4g02148 521 SUPERFAMILY Protein kinase-like (PK-like) 101 477 IPR011009 -
Vivi4g02148 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Vivi4g02148 521 Gene3D Phosphorylase Kinase; domain 1 445 455 - -
Vivi4g02148 521 MobiDBLite consensus disorder prediction 1 24 - -
Vivi4g02148 521 Gene3D Transferase(Phosphotransferase) domain 1 199 266 - -
Vivi4g02148 521 ProSiteProfiles Protein kinase domain profile. 119 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02148 521 SMART serkin_6 119 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02148 521 CDD MobB_NDR_LATS-like 53 114 - -
Vivi4g02148 521 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Vivi4g02148 521 ProSiteProfiles AGC-kinase C-terminal domain profile. 427 499 IPR000961 GO:0004674|GO:0005524|GO:0006468
Vivi4g02148 521 FunFam Non-specific serine/threonine protein kinase 325 444 - -
Vivi4g02148 521 Pfam Protein kinase domain 318 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02148 521 Pfam Protein kinase domain 121 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02148 521 CDD STKc_NDR_like 117 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02148 Vivi-Chr4 105867917 105872039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02148 38 509 AGC Kinase Gene Family AT2G19400 75.472 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Vivi4g02148 Pkinase 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02148 K08790 - gmx:100811359 839.721