Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02135 ATGAAGAAAGGATGCTTAGATCCAAATCTCAAACTCACTGTTCCTGCATCCAATCAAGCTTCTTTTGCAAAATTCTTGACTCAAAGTGGCACTTTTAAAGATGGAAACTTACTTGTTAATAAGGATGGAGTTAGAATTGTCTCTCAGAGTGAAGTTGAAACTCAACCACCAATAAAGCCAATAGACAATCAGATAACTTTGGCAGAGATTGATACAATCAAAGTGATTGGAAAGGGAAATGGAGGGATAGTCCAATTGGTTCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGCAAATTCAAATGAATCTTGAGGGTTCTACATGCAGACAAATAGCACAAGAGCTAAAAATCAATCAATCAGCGCAATGTCCTTACGTTGTTGTTTGTTACCAATCGATCTACGATAATGGCACGATATCAATCATCTTAGAGTACATGGATGGAGGCTCCTTAGAGGATCTGTTAAACAAAGTTATAACGATTCCAGAACCGTTTCTTGCCGCCATTTGTAAGCAGGTGCTAAAGGGTTTGATGTATCTTCACCATGAGAAACACATTATTCATAGGGACTTGAAACCTTCTAATATACTTATAAATCATAGAGGGGAAGTAAAGATTACCGATTTCGGTGTCAGTATAATCATGGAAACTACTTCTGGTCAAGCAAATACTTTCATCGGTACATACAACTATATGTCTCCGGAAAGAATCGATGGAAGCCAACAAGGTTACAATTACAAAAGTGATATATGGAGCTTGGGATTGATGTTGCTTAAGTGTGCAACGGGGAGATTTCCATATACACCACCAGATAATAGCGAGGGATGGGAAAATTTGTTTCAGCTTATCGAAGCCATTGTCGAAAATCCTTCACCAAGTGCTCCTTCTGATGAATGTTCACCCGAATTTTGCTCGTTTATCTCAGCATGTTTACAGAAAAATCCAAGGGACAGACCATCGGCTCGAAACCTATTGAGGCATCCTTTTGTGAACATGTATGACGACTTACATGTGGATCTTTCGGACTATTTCTCCAATGCAGGGTCTACACTTGCAAACATATAA 1071 0.3847 MKKGCLDPNLKLTVPASNQASFAKFLTQSGTFKDGNLLVNKDGVRIVSQSEVETQPPIKPIDNQITLAEIDTIKVIGKGNGGIVQLVQHKWTNQFFALKQIQMNLEGSTCRQIAQELKINQSAQCPYVVVCYQSIYDNGTISIILEYMDGGSLEDLLNKVITIPEPFLAAICKQVLKGLMYLHHEKHIIHRDLKPSNILINHRGEVKITDFGVSIIMETTSGQANTFIGTYNYMSPERIDGSQQGYNYKSDIWSLGLMLLKCATGRFPYTPPDNSEGWENLFQLIEAIVENPSPSAPSDECSPEFCSFISACLQKNPRDRPSARNLLRHPFVNMYDDLHVDLSDYFSNAGSTLANI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02135 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02135 356 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Vivi4g02135 356 CDD PKc_MAPKK_plant_like 68 336 - -
Vivi4g02135 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02135 356 Gene3D Transferase(Phosphotransferase) domain 1 150 354 - -
Vivi4g02135 356 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g02135 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Vivi4g02135 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 14 349 - -
Vivi4g02135 356 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Vivi4g02135 356 SUPERFAMILY Protein kinase-like (PK-like) 69 339 IPR011009 -
Vivi4g02135 356 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Vivi4g02135 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02135 Vivi-Chr4 105625082 105627973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02135 27 353 MAP Kinase Kinase Gene Family AT4G26070 66.667 1.03e-165 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Vivi4g02135 Pkinase 2.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02135 K20603 - qsa:O6P43_002713 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02135 4 105625082 105627973 Vivi4g02135 4 105625082 105627973 ECH