Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02124 ATGGTTCTAATTGAGACAGCATCAGAATGGGAGGAGTTGAACCAGCGATACAGGTCTGAGAAAGTATCTGTGTGGTGGGTTTTAGAAAACTGGGATGAGTACAAGGATGTTGATCCTTGTCGTATAAAAGAAAACATCAGTATAGCACTTGCTAAGGAGGACTACAAGGGTTCCGTTTCCATCTCTTGCTACGTTGACGAAGTTAACGCAACTAAAATTCCCGAACATGTGCTGACGGATCTCTCGTCGTCCGGAATTTCCACCAACCATTATCCTAAAGATGAGAAGCCTGTGATGCTCATTGTGGACATGTTGCGTTGGGCAGAATCCAACCCTCCACCTGCAAATTACTTATTTATATTCAATGATGATGATGATTATGATGCCGGATTTACTTATGCAATCGATTATCTCCTATGTTGCAAGTATAATATTCTTCTTGCATCCCCAGAGGCATGTGCACCATCCCTCGTTTCACTTTCCAAGAGAGTATGGCTTGTGCGTAGTCTATTTTCAGGAGAATCTCCGGCATCTGAGGAACAAGTTATGAAACTTCGTGGCTCCGATTCTGATGAAGAGGTTCCCATTCTGATGGGTGATAGTACAACAGGGGCTCCGATTCTGAGTCAGCTCTTGCTAAGGAAAGTATTTTTGGATCTCTGGAGTTTTTGTGTCATGGGGATATAG 687 0.4323 MVLIETASEWEELNQRYRSEKVSVWWVLENWDEYKDVDPCRIKENISIALAKEDYKGSVSISCYVDEVNATKIPEHVLTDLSSSGISTNHYPKDEKPVMLIVDMLRWAESNPPPANYLFIFNDDDDYDAGFTYAIDYLLCCKYNILLASPEACAPSLVSLSKRVWLVRSLFSGESPASEEQVMKLRGSDSDEEVPILMGDSTTGAPILSQLLLRKVFLDLWSFCVMGI 228
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02124 228 Pfam NYN domain 21 159 IPR021139 GO:0004540
Vivi4g02124 228 CDD PIN_limkain_b1_N_like 21 150 - -
Vivi4g02124 228 PANTHER LIMKAIN B LKAP 13 182 IPR024768 GO:0005777|GO:0010468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi4g02124 Vivi-Chr4 105348255 105351488 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02124 17 176 C2H2 Transcription Factor Family AT5G61190 41.718 2.30e-26 105