Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02116 ATGCAAATAAAAGGGCAATGGAACAAAAATAATCCACATGTTTATAAGCTTGTTGAATGCTACAAACAAGCCGTGTCTACACAACAAAGTGGGAGTTCCGAGAGCAATATCATGCAAGGTGAAAAGTTTACATTTGAAGCTGCATGGAGATTATTGAAATATGAATCTAAATGGCTCGCAGGTTCATCAGAAGCTTCTACAAAAAGAAGAAAGAATTCAGCTTCAGGAGCATATTCTTCATCTTCTAATGCATTAACACCAACAAGCAGCGAGTACGATCCATCATCACCTATTTTGTCACGTCGTCTAATCGGTCAAAAGACAGCCAAAAGGAAGGAGAAAGAAAAGATTGTGGAAATGTCTTTTACACCCAATCTCAAATATGGTTTTTTGAAAGATGGCTTACAAAAAAATATTGATCTGATGTCAATGTTTGCACATGACTATGCATGCATTGAGGGTGAAAAACTTGAGATAGAGAGAAAAAAGGTTGATGCAAAGATTAAGAAGGCTGAGATTGCCGAGGAAAGATTAAATATGAATGATATGCAAATACTCTCAAAAGATACATCAAATATGGATACAAGAAAACTACAAGCTCATGAAATATTGTGCGACATGATTAGAGAAAAATATGAAATTAATGAGTATGATTATTATTTTGTGCTTAATTAG 675 0.3452 MQIKGQWNKNNPHVYKLVECYKQAVSTQQSGSSESNIMQGEKFTFEAAWRLLKYESKWLAGSSEASTKRRKNSASGAYSSSSNALTPTSSEYDPSSPILSRRLIGQKTAKRKEKEKIVEMSFTPNLKYGFLKDGLQKNIDLMSMFAHDYACIEGEKLEIERKKVDAKIKKAEIAEERLNMNDMQILSKDTSNMDTRKLQAHEILCDMIREKYEINEYDYYFVLN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02116 224 MobiDBLite consensus disorder prediction 65 96 - -
Vivi4g02116 224 Coils Coil 154 177 - -
Vivi4g02116 224 PANTHER - 2 211 - -
Vivi4g02116 224 MobiDBLite consensus disorder prediction 65 97 - -
Vivi4g02116 224 Pfam No apical meristem-associated C-terminal domain 42 195 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02116 Vivi-Chr4 104738745 104739419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02116 6 114 Glutathione S-transferase Gene Family AT5G41240 35.200 8.55e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02116 - - vvo:131597607 441.039