Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02111 ATGTTGAATTTGGCTTGTTCTAGGATCAAGCTTCCTTCTGGTGCCAAGAAGGTTGTGCCAAGTGATTGTAGGGCTATGATTGGGCAAGTTGTTGGAGGTGGAAGAACTGAGAAGCCCGTGTTGAAGGCGGGTAATGCATACCATAAGTTTAGAGTGAAGAGGAATTGCTGGCCCAAGGTTCGTGGTGCACCTCCTGGACAGAAGGTTGATCTCATTGCTGCCAAGAGGACTGGTCTTAGGGGACAAGCTGCTGCAAGTGCTGCTAAGGCCGATAAATGA 279 0.491 MLNLACSRIKLPSGAKKVVPSDCRAMIGQVVGGGRTEKPVLKAGNAYHKFRVKRNCWPKVRGAPPGQKVDLIAAKRTGLRGQAAASAAKADK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02111 92 PANTHER RIBOSOMAL PROTEIN L2 6 63 IPR002171 GO:0003735|GO:0005840|GO:0006412
Vivi4g02111 92 Pfam Ribosomal Proteins L2, C-terminal domain 7 63 IPR022669 GO:0003735|GO:0005840|GO:0006412
Vivi4g02111 92 SUPERFAMILY Translation proteins SH3-like domain 7 77 IPR008991 -
Vivi4g02111 92 SMART Ribosomal_L2_C_2 4 80 IPR022669 GO:0003735|GO:0005840|GO:0006412
Vivi4g02111 92 Gene3D Ribosomal protein L2, domain 3 31 63 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02111 Vivi-Chr4 103917957 103918235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02111 6 91 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 64.912 2.64e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02111 K02938 - vvo:131597600 171.4