Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01990 ATGGCTTTAGCCATTTCATCCACTTCATTATCATCAAGTTTTCCAAACAGAGAAATATGTCAAAAGGTTTTACACCAAGGAACTACAACAACTTCATGGTTAAGTAGAAGAAGGACACTTACGATTAGAAATGCGAAAAAAGGTGTGTCGGATTTGTGTATACCACTTCCTCCAGATAGGCCTTTGTGGTTTCCAGGTAGTTCAGCTCCTGAATGGCTTGATGGCAGTCTTCCTGGTGATTTTGGTTTTGACCCTCTTGGATTAGGCTCTGATCCAGAGTTACTAAAATGGTTTGCGCAAGCAGAGCTAGTGCATGGAAGATGGGCAATGTTAGGAGTATCAGGAATCCTAATCCCCGAAATACTCGAAGGAATGGGCTACATAAAAAACTACTCATGGTACACTGCAGGTTCAGTACACTATTTCGCAGACCCAATAACACTCTTCATTGTTCAACTAGCTTTAATGGGCTGGGTTGAAGGTAGAAGATGGGCTGATATCGTCAACCCGGGGAGCGTTGATATCGAGCCCAAGTTTCCAAATAGGCCTAACCCGAAACCAGATGTTGGTTATCCCGGCGGGCTTTGGTTTGATTTTATGCAGTGGGGAAGAGGGTCTCCTGAGCCTGTTATGGTTTTGAGGACTAAAGAGATTAAGAATGGAAGACTTGCTATGCTTGCTTTTGTCGGGTTTTGTTTTCAAGCTGTTTATGTTGGAGATAGCCCTATTCAGAATTTGATGGCTCATCTTGCTGATCCCGGTCACTGCAACATTTTCTCGGCTTTCACTTCAAGGTAG 798 0.4348 MALAISSTSLSSSFPNREICQKVLHQGTTTTSWLSRRRTLTIRNAKKGVSDLCIPLPPDRPLWFPGSSAPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELVHGRWAMLGVSGILIPEILEGMGYIKNYSWYTAGSVHYFADPITLFIVQLALMGWVEGRRWADIVNPGSVDIEPKFPNRPNPKPDVGYPGGLWFDFMQWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFCFQAVYVGDSPIQNLMAHLADPGHCNIFSAFTSR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01990 265 SUPERFAMILY Chlorophyll a-b binding protein 59 264 - -
Vivi4g01990 265 FunFam Chlorophyll a-b binding protein, chloroplastic 70 255 - -
Vivi4g01990 265 Gene3D Chlorophyll a/b binding protein domain 70 255 - -
Vivi4g01990 265 Pfam Chlorophyll A-B binding protein 69 235 IPR022796 -
Vivi4g01990 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 263 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01990 Vivi-Chr4 95474299 95476080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01990 58 265 Chloroplast and Mitochondria Gene Families AT3G61470 66.346 6.99e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01990 K08908 - qsa:O6P43_002643 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01990 4 95474299 95476080 Vivi4g01990 4 95474299 95476080 ECH