Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01986 ATGATGGTTGGTCTTCCGTCACCTGAAAACAGGGAAGTGATCTTGAAAACTCTTCTAGCTAAGGAAAAATATGAAGATATAGAATTCAAAAAGCTTTCAACTTTGACAAAAGGATATAGTGGGAGTGATCTTAAGAACTTGTGCATGACTGCAGCATATCGCCCCGTTCAGGAGCTAATGCAACAGGAGAAGGCCAAAGAAATGAAAAAAGAGGCAGAAATTGAAATCTCAGAAGTCGCCTCCAATGCTACGGAAGAAGATCAAGTGATTGTCCTCAGGCCTTTAAACATGGAACACATGAGAGATGCAAAGAACAAGCTTTTGAAGATCCCGCACTGCAGTTGA 345 0.4116 MMVGLPSPENREVILKTLLAKEKYEDIEFKKLSTLTKGYSGSDLKNLCMTAAYRPVQELMQQEKAKEMKKEAEIEISEVASNATEEDQVIVLRPLNMEHMRDAKNKLLKIPHCS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01986 114 Gene3D - 4 112 - -
Vivi4g01986 114 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 106 - -
Vivi4g01986 114 Pfam AAA+ lid domain 26 69 IPR041569 -
Vivi4g01986 114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 67 IPR027417 -
Vivi4g01986 114 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01986 Vivi-Chr4 95140968 95143508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01986 1 81 Calmodulin-binding Proteins AT3G56690 35.294 2.57e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01986 - - vvo:131599364 201.06