Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01947 ATGCAAACTCATCTCACACTCACTCCTCTCTTCCTCTACTTCATCTTATCTCTCTCCACCTCCATCTTAGCCCATGACCAATCCCAACCCCAAGATCTAGTCCGTTCCTCCTGCCTTCACGCCAGATACCCAAAGCTATGTCTCCGAACACTCTCCACCTACACCGGCCCCGCCAAAAGTCCACTAGACATAGCCCAGGCTGCACTCCGGGTAAGCCTAGCCCACGCCAAGAGAGTCTCCAAATATATAGGATCCTCCAATGTCGGATCCCACAGCAGCAGTAGCTTGAGTAAGCGTCAGCAGGCTGATCTCAGTGACTGCAAAGAGCAGATAGCTGATTCTGTTGATGAACTCCGGAAGAGCTTGGGGGAGTTGCAGCATATGCGACCGGAGACGTTCCGGTGGCAGATGAGCAATGCTTTGACGTGGGTGAGCGCTGCTCTCACTGATGGGGATACTTGTCTTGATGGGAATGTGATGCCGGATGTGAAGAAGAGGGTTACTGATCTTGCGAGAGTGACGAGTAATGCTCTTTACATGATTAACCGTGTTGGATGA 558 0.5161 MQTHLTLTPLFLYFILSLSTSILAHDQSQPQDLVRSSCLHARYPKLCLRTLSTYTGPAKSPLDIAQAALRVSLAHAKRVSKYIGSSNVGSHSSSSLSKRQQADLSDCKEQIADSVDELRKSLGELQHMRPETFRWQMSNALTWVSAALTDGDTCLDGNVMPDVKKRVTDLARVTSNALYMINRVG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01947 185 FunFam Pectinesterase inhibitor 3 29 185 - -
Vivi4g01947 185 SMART PMEI_2 29 180 IPR006501 GO:0004857
Vivi4g01947 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 183 IPR035513 -
Vivi4g01947 185 CDD PMEI-like_3 36 183 - -
Vivi4g01947 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 184 IPR035513 -
Vivi4g01947 185 NCBIfam pectinesterase inhibitor domain 11 182 IPR006501 GO:0004857
Vivi4g01947 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 179 - -
Vivi4g01947 185 Pfam Plant invertase/pectin methylesterase inhibitor 32 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01947 Vivi-Chr4 91308362 91309437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01947 33 184 Carbohydrate Esterase AT3G14310 29.940 1.04e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01947 - - mtr:25486551 261.922