Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01924 ATGGAGTACGGTGGAGGCTCGAAAATAACCGGGATTAGGCAGATTGTGAGACTAAGAGAAATAATTCATAAATGGCAAAGTGTCACAATAGGCGCAAGAACTTCCCGCCTAAAAATTGAAGAATCTCAGGGTAGCAGCAAATCTCCAATAATCAACAAAAGAATAACAAATCTCATAAGTTGTGACTCTGATGACGAAAGCTGCAAAACTCCAGAACCACCACCTGATGTGCCAAAAGGTTACTTGGCGGTCTATGTTGGACCCGAGCTTCGACGGTTCATTATTCCAACTAGCTACCTTAGCCACCCTCTATTCAAACTGTTGCTTGAAAAGGCTGCTGAGGAATTCGGATTTGATCAGAGCGGCGGGCTCACCATACCGTGCGAGATTGAGACCTTTAAATATCTACTCAAATGCATTGAGGCCCAGGAGAAAGAAGAACAACATGATGACAGCTTGTCTGGAAACTCAGAAACAGAAACAGAAACAGAAAGAAACCTTGGAAGAGTAATTGTAGTTATTATTATGATCTCTGTTGAGGTTCACATTCATAGGATGTTTTCAGGTGTAAAAGTGGTTCTCTCTGCTTCCATTTTTTTATTTTATTATAGTTTCTTATGTGAAGAATGA 630 0.4063 MEYGGGSKITGIRQIVRLREIIHKWQSVTIGARTSRLKIEESQGSSKSPIINKRITNLISCDSDDESCKTPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHPLFKLLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCIEAQEKEEQHDDSLSGNSETETETERNLGRVIVVIIMISVEVHIHRMFSGVKVVLSASIFLFYYSFLCEE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01924 209 Pfam Auxin responsive protein 60 140 IPR003676 GO:0009733
Vivi4g01924 209 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 54 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01924 Vivi-Chr4 89962992 89965379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01924 1 162 Calmodulin-binding Proteins AT3G43120 60.976 3.20e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01924 K14488 - tcc:18588225 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01924 4 89962992 89965379 Vivi4g01924 4 89962992 89965379 ECH
Vivi1g00830 1 17852788 17854371 Vivi4g01924 4 89962992 89965379 PCT