Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01816 ATGCTTCTGGCATCATTAAACCATCAAGGTATATTCAACATTAACTCATCATTAAATGAATCTGCTCTTGGAATATTTGGAATTAGTCAAAATGACGTTCATGTTGGAGAAATGACTGTTAAAGAAACATTGGATTTCTCAGCTAGATGTCAAGGAGTTGGAACTATATATGAGTGGAAATGGGCAAAGCCTGAAGATGTTATTGAGCAGGCTGTGGACTACAAGAGACCTTCTCAAGAGCTTGTAGCTATTGATCTGCATAGCCTGGAATGGAGGTTTCGGCACATTTACAGGGATGGAGTGCTACTTTGA 312 0.391 MLLASLNHQGIFNINSSLNESALGIFGISQNDVHVGEMTVKETLDFSARCQGVGTIYEWKWAKPEDVIEQAVDYKRPSQELVAIDLHSLEWRFRHIYRDGVLL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01816 103 SUPERFAMILY DNA-binding pseudobarrel domain 72 100 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01816 Vivi-Chr4 83282283 83291153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01816 71 98 B3 DNA Binding Superfamily AT5G60450 70.000 9.76e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01816 K08711 - vvo:131594945 198.749