Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01812 ATGCTTCTGGCATCATTAAACCATCAAGGTATATTCAACATTAACTCATCATTAAATGAATCTGCTCTTGGAATATTTGGAATTAGTCAAAATGACGTTCATGTTGGAGAAATGACTGTTAAAGAAACATTGGATTTCTCAGCTAGATGTCAAGGAGTTGGAACTATATATGAATTTGCAGAGTGGAAATGGGCAAAGCCTGAAGATGTTATTGAGCAGGCTGTGGACTACAAGAGACCTTCTCAAGAGCTTGTAGCTATTGATCTGCATAGCCTGGAATGGAGGTTTCGGCACATTTACAGGGGTATGTCGCTTTTAGTATTTCACATTATAGTACACTGCCAGCTGACTGCACATTTACAGGGCCAGTTCTTCAGATTTCATCATATCTGCTAA 396 0.3889 MLLASLNHQGIFNINSSLNESALGIFGISQNDVHVGEMTVKETLDFSARCQGVGTIYEFAEWKWAKPEDVIEQAVDYKRPSQELVAIDLHSLEWRFRHIYRGMSLLVFHIIVHCQLTAHLQGQFFRFHHIC 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01812 131 SUPERFAMILY DNA-binding pseudobarrel domain 75 103 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01812 Vivi-Chr4 83282282 83290736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01812 75 102 B3 DNA Binding Superfamily AT5G60450 73.333 9.52e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01812 K08711 - vvo:131594945 273.863