Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01790 ATGGAAGTTGAATACCAGTGGGTGATGGGAAAGTTATGGTGGACAATTGGGTTGATAGTGATAAGCAGTGTTGTGATATTGGTGGAGAAAGTGTTGTTGAAGCCAAGAAGGATTCGGTCAGTGATTGAAAAACAAGGTATCAATGGACCAAAGCCATGTTTTCCCTATGGCAATATTTCTGAGATGCAGCAAATTCGTCCTCAAGCTTCTGCTTCTTCTGATCCGTATCAGGAATGGATTCATTCACTGTTCCCGTATTTCCAAACCTGGAAACAACGCTATGGTTCAATTTATCTATACTCTACCGGATTGAAACAACATCTATACGTGGGGAAGCCAGAATTAATAAAAGATATAAACTTGCATACATCCCTAGATCTAGGCAGGCCTTCGTATCTAAGCAAACCACTAATGCCAATGCTTGGAAATGGCATCCTCAGAGCCAATGGACAACTATGGTCTTTCCAGAGAAATCTTATTGTTCCTGAATTCTTCATGTCCAAAATTAAGAACATGATAGATATTATGGAGGAATCTACAATAACAATTATCAAAAAATGGGAGAGTTGTATAAGTGAAAATGCAGAAAAGATTGCAGAGATAGTGATTGAAGTTGATTTGAAGATTCTCACAGAAGATATTATTTCAAAAGCTTGTTTTGGCAGCGATTACACACAAGGAAAGCAAATATTTTCAAAATTGAAAGACATGCAAGCTGCACTTTCAAAGCCTAGTATACTATTCGGATTTCTAAACCTAAGTTTTTTTCAAACTAAGGAAAGCAAAGAGATGTGGAAGTTGAAGAAAGAGGTGGACGAGTTGGTAATCAACATCGTCCACAATCGTGAAATACAAAACCGAGAGAACAATATAAACGAGAAACGGAGTGATCTATTACAAAAAATACTAGAAGGTGCTTCAAATGATGTCGGCCAGAACAAGAATCCAATAATTATAGATCTCTGCAAAAATATATACTTTGCTGGCTCTGAGTCAACCGCTCTTGCAATTTCTTGGACATTGCTGATGCTTGCATTACATCCGGAATGGCAACAACGCGTTCGTTCTGAAATTTTGGATACTTTCGATAACAGTTCGCCTTGTTTTTTTGACGACTCTAGCAAACTTCCAAAATTGAAAGTGCTAACAACTGTGATTCAAGAGAGTTTACGTCTATACGGACCTGGAGTGTTCGCGACAAGAGAAGTTTTAGCTGATATGAAGTTGGGAGACTTTGTGCTCCCTAAAGGGATCTTTACGTGGCTGTTCATTCCATCGCTGCATCGCGACACTGATAATTGGGGGCCGGATGCCACAACATTCAAGCCAGAAAGATTTGATAACGGTGTTTCTGCAGCTTGTAAGTATCCTCAAGCATATATACCATTTGGACTTGGGAGTCGAAGCTGTCTTGGTCAAAACTTTGCCATTACTCAAATGAAGATAATACTCAGTCTTCTTATTTATAATTTCTCATTTGAGGTTTCACCAAATTATAGGCATTTTCCTGTCTATAATATGCTGTTGATGCCAAAATATGGTTTAAAGCTTCTTGTTAGCAAGGTTGATAGCTCTGGAAAATGA 1584 0.3838 MEVEYQWVMGKLWWTIGLIVISSVVILVEKVLLKPRRIRSVIEKQGINGPKPCFPYGNISEMQQIRPQASASSDPYQEWIHSLFPYFQTWKQRYGSIYLYSTGLKQHLYVGKPELIKDINLHTSLDLGRPSYLSKPLMPMLGNGILRANGQLWSFQRNLIVPEFFMSKIKNMIDIMEESTITIIKKWESCISENAEKIAEIVIEVDLKILTEDIISKACFGSDYTQGKQIFSKLKDMQAALSKPSILFGFLNLSFFQTKESKEMWKLKKEVDELVINIVHNREIQNRENNINEKRSDLLQKILEGASNDVGQNKNPIIIDLCKNIYFAGSESTALAISWTLLMLALHPEWQQRVRSEILDTFDNSSPCFFDDSSKLPKLKVLTTVIQESLRLYGPGVFATREVLADMKLGDFVLPKGIFTWLFIPSLHRDTDNWGPDATTFKPERFDNGVSAACKYPQAYIPFGLGSRSCLGQNFAITQMKIILSLLIYNFSFEVSPNYRHFPVYNMLLMPKYGLKLLVSKVDSSGK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01790 527 Gene3D Cytochrome P450 34 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 Coils Coil 281 301 - -
Vivi4g01790 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vivi4g01790 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 514 - -
Vivi4g01790 527 SUPERFAMILY Cytochrome P450 79 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi4g01790 527 Pfam Cytochrome P450 83 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01790 Vivi-Chr4 81198593 81202670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01790 115 519 Cytochrome P450 AT5G24900 42.410 1.22e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01790 - K20661 gmx:100802008 644.425