Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01758 ATGTATAATCAAGGGAATCACGGTTCGAATTCGGGACAGGGTTCAATCCCTCCACCTCCTCCTGTACTGCTGCCACCGCCACCACCACCACCGCCGTTGAGTTATCAGCAGGCACTTCCGCCTCCTCCACCGCCGCCTCATTTTCAGCATTTTGCCCCACCACCAGCTCCGCATGTTTATTTACATGGATCCCCGCCCGTGCCAAATACTAGACCTTCATATTCCATTCCCTCTCAAATGCACCATGGAAATGGCATGGGTCAACAAACATTCCCTACCATTGGACAAAATTCCCAACATTCTTCAAATTTAGGTGTCCATTGTCATACCATTCCGCCCCCAGTTCCTCCCCCTATTGGCCACTCTCATCAGGAGACATCTTGGGCTCCTAGGCTGCCAAGTAGAGTGTTGCCACCTCCTACCTCTTCTTCCCAAGGACAAATTTTGCATAACCATCGTCATCTTCCTCCTCCACCACCCCCTCCCCCTTTTCATGCTCCGTCTCCTGATGGCGTTTATGGTCATTCAACTGTTGGGAATTACCACCACATGCCTTCCATTGCCCCTCCACCGTCACTACCGCCATTGCCAAGCTCTCCGCCACCGGTTCTGCCATCTCCCCCACCTCCTGCCTCTCTTATAGCTTCTACATCCTCCCAAGCTGCATGCACCGATGACCCTTACTCTAAGGAGGTTCCTAGATTTGAATCAAAGGCTGTGGAGTCAGTAGAAGGATTTGTAGCTTCCTGTCCATCTGATACTGTGTTTGTACATAAATCTGATTCTGAAGCCAATCAAGATGTTGGAAATTGTGGTGATGTTGCTCTGGATCCCCTCAGAGATGAGCTATTGCCGACTAAAAGTGTAATATTGGATCTTACCCCACCTCTGCCCCAGTCTGCAGAAGAAAATACTGTAAGTGCTGATTCTGACATGGAGATGGAAGATGATATCACACTTTCTGACAAAGACCAAGGATCAACTTATGCAATTGAAGGGGTAACTCTGCTGCATGATCGGGTTGATGAGGTGTTTAACATTAATGAGAAAATACAGAGGCTGCAGAGTTCAATACAAGACGAACCTGCTAAGGGCATCTTATCCAGTGGTGTATCATGCTCTGGATCCACAGGAGTCAGCAAAAAAAATGAAGGAGTAGGACCTGCATCTGATGTTGAGCCCATGAAATCTACAAGATCAGATACCAAGGTTCTTAGTCCCGCGAATGACTCAATTGAATTGGCTGAAGCCCTCCCAAGCACTGGGCCGGGAAGATTGGAAGTTTCTCTAGACAAGGACTTTATAAGAAATGGTACTTCCGATCTTGGCGAAGCCACCGATTCCAACAGAGATTCTGAGCAACTTATGAGGATCGGCAGCCCGATTAGACTTCTTCAAAATTATGCTTCTGATGAAACTTCAGATAATGAAGATGGAGGTTGTACAGAAGATGCTAATAATGTTAATACAGACTCTGCAGGAGCTGATTCTTGTGTTCCGGATGCCCTTAAAGATTGCAAGAGTAATTTGGAGACTGGTCTTGGATCTAAAAGTCCCTCTTATACTGAAAAGGCGATTGGTCTGCTCTCCAAAGCATCACATAATAATTCAGAAATATCTCCATGTTTAGTACAGGAGCCCGAGGTAACCTGTAAAAGTTCCATCTCACGTACTAGTGATGGGTGTGTTGCGCCTAACATTGAAAATCAGGTGTCTGTTAATTTTGCTTCTTCAGTTGGAGCTTTACAAGTAGAAGACAGGTTAGGTGATACTGGTTTTGACATTGATAGTAAGAGTGGTACTGCTGAACAAAAACGTGAGAAGGAAACCTCAAAGTTTGAACCAACTGTTCTAAAAGTAGATGAATTCGGGAGGCATATCAGAGACGATGCTTCAGATAGCGGCTCTGATGAATCTCGCAGTCATCGGACTAAGAGGACGAACAAAAGAGATAGAAGCCGGAGTCGCAGCCGGTCTCGATCTCCCATTGACAGAAGGAGTAGGAGAAGAAGAAGAAGTCCTCGGAGGAGAAAGCATAAAAGAAGCCTCTCTCGCAGCTGGTCTCCTCGGCGGCGTAGAAGCAGGAGTAGGTCTCCAATCTTAAGACGTTCAGGTGACACTCATGGGGAAAATGTGAGAAGGAACAAGGATCAATGCTATGATTTCTTACGTAAAAAGTGCTATCGTGGAGCATTATGTAGGTTTGCGCATCATGAATCTGACAGGAGTGCTACTTCAAGGCACTCCAGGAATAAACATGATCTGGAACTTGATTCTCGTGAAAAAAGTTCTAGGGTTAATGAAGAAGTTAAGAGTATTTCTTCTAAAGTGTCAGATTATGAGCATGATGGAGTCAGAAATCAGGACACAGATCTTCACCAGAATATAACTGGCCAGGAAGTAGTGCAAAGAAAGGAAGATTCTGAGGGCCACGCCGTTGTGTCTACTACCTTTGGTATCGATGGTCAATCGTTTAACAGCATTCCAAGTTCTGAACGTGTTAGAGAGGTTTCTCCTAAGGTGCATGAAACCTTAGTAGTTGTAGAAAAGCCCAAGACTTCATTACATGAAAGTGGTAGTTTTCAGAATGCATTAAGTTCTCATCAGCAGCACTTAGTTGATGACTTTCAGCCTGAAGCTTTAATTCATGCTGATGCTTCTATACCATCTGGTAGTACATCTAAAGATGTTATTCCATCAGAAGATGGTTCATTTGTTCAGCAACTACAATCCAATGTTTCTGTTGAAGTTCCAGAACATTCTGGTGGTACATCTAAAGATGTTCTTCTTTCAGATGCTGGTTCATTTGTTCAGCATCTACCATCCAATGTATCTGTTGGAGTTCCAGAACATTCTGGTTACCCATCTCAGCTTCTAAATGTGGCCGGTGCGACTGGTTTGTCATCTGATAAAAGATCTGCTAATGAGGTTTCTGGTAGTGAACCTTTACCATTTACGTTACCATCTACACAACTACACTCGGCCACTAGTTCTATTGGTCCATGTGTAGCATCAGAGCAGCCTTCATTGCACCCTCAGGGTTTTAAAGAGTTACCTCCAATAAGTGTTTCATCGGTGCAAATCCCTCTTCATACTTACCCATTGCCAGCCTTTGCTGGTTCACATTTCCAGGGTGAAAATGCCGGGCATATGCCACAAATTCCAAGGCAGTATGGTGTGGCGCAGCAAAATGCATTATTTCCTTTCCAATCTCCTTACCCACCTTCGTTACAGACACCAAATTCTCATTTCAGTGTACCGCCTCATAGCTCTTGGACATCATTGCCGCTGCCACCGCCGCCTCCACCACCATCACAGGCCGTGTATAATTCCAGTTCTAACTTGGGAGTTGCAAAATCCTTTATTTCTTCCGAATTTAATCAGAATCAACTGCATTCAAGATCTGATTATGTTTCCCAGACTTCCTTGATTCATGGGTTACCATCTAATTCTCAAAATTCGAAGTTTGAAGATCAACCTTACCCTCCAATGCAGGACCATTCACAAACTTTCGTGCGTACAGAACCTCTATCTCCCAAGCATCTTCATCAGGGGAACCCGGCATACCAATCACTTTCAAGCTCCACATCTTTTGGTGGCCTGCATCATCAACCAAAACAATTTTCCTGGGAGTCAGATGTGAACAGACCACAACCTTCTTTGGGCGGCAGGTTGCCTCCTGAAGGAAATTTCAGCACTTCCTCCCACATTCATCCATTATCACAGCAACAACAATCAGTTCATAATTTTCAATATGCTTCATCTGATGTTAATTTGCCCGGACCTGGAGGAACTGCTACTGTATCCAGATATCCACCAGATATTCCTGATAGCAACCATTCAACTTCTCTTCCGGCTTTTGGACCATCAAGAGTTTCTGCCCACTATAATCCTTATGCATCAACCTTTGAGCAGCCGCTAAGTTCAAAATTCAGTTCTAGCTTTTTACGACAAGAAAATGATATAGTTTATGGTAAAAATTATGGTCCTTCTAGATATAGGGAAGGGGATAGTGTTGGATCAAGGCATACAGCATCGCCCAAACCAGCAGCAGCTGTTGGTCGGATCTTGCCAGGGTCTGGTGAACAATATGATCCACTTTTTGACAGCATTGAACCATCATCATCTTTGAAGAAATTTGATTTTGAGCAGAAGCAGGAAGTTACAGGTGAATCCAATTTCAGCCTAAGGCCTAAAAGTTCTCATATGTCTTTGGATGCCAAAGAGAAGAAGCATGAGAAGGTTGGGGCTGTTGCCTCTACCAGTTCTCTAAATAATGATGAATATGGGGAGACAGCAGATGCTGAGGTGGGTGCTGTTGACAATGAAAGCCTAAGTAATGATGTAGATGTTGCAAACATGTCTCCGGAGGAGGATGAGATTAATCAGACCAAATCTCCAGGGAAAAGAAAGAAGAGCAAGGATTCTAGATCAATGAAATTATTCAAAGTTTCCATTGCAAACTTTGTAAAAGAGGTTTTGAAACCATCATGGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTGAAAAAGACCGTAGACAAGGTGTCGGGAGCCATGAAAGGCCATCGTATACCCAAATCTCAAGAGAAGATAAGTCAATATATTGACTCATCACAGCGGAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAATATGTCAAGGTGTGA 4683 0.4407 MYNQGNHGSNSGQGSIPPPPPVLLPPPPPPPPLSYQQALPPPPPPPHFQHFAPPPAPHVYLHGSPPVPNTRPSYSIPSQMHHGNGMGQQTFPTIGQNSQHSSNLGVHCHTIPPPVPPPIGHSHQETSWAPRLPSRVLPPPTSSSQGQILHNHRHLPPPPPPPPFHAPSPDGVYGHSTVGNYHHMPSIAPPPSLPPLPSSPPPVLPSPPPPASLIASTSSQAACTDDPYSKEVPRFESKAVESVEGFVASCPSDTVFVHKSDSEANQDVGNCGDVALDPLRDELLPTKSVILDLTPPLPQSAEENTVSADSDMEMEDDITLSDKDQGSTYAIEGVTLLHDRVDEVFNINEKIQRLQSSIQDEPAKGILSSGVSCSGSTGVSKKNEGVGPASDVEPMKSTRSDTKVLSPANDSIELAEALPSTGPGRLEVSLDKDFIRNGTSDLGEATDSNRDSEQLMRIGSPIRLLQNYASDETSDNEDGGCTEDANNVNTDSAGADSCVPDALKDCKSNLETGLGSKSPSYTEKAIGLLSKASHNNSEISPCLVQEPEVTCKSSISRTSDGCVAPNIENQVSVNFASSVGALQVEDRLGDTGFDIDSKSGTAEQKREKETSKFEPTVLKVDEFGRHIRDDASDSGSDESRSHRTKRTNKRDRSRSRSRSRSPIDRRSRRRRRSPRRRKHKRSLSRSWSPRRRRSRSRSPILRRSGDTHGENVRRNKDQCYDFLRKKCYRGALCRFAHHESDRSATSRHSRNKHDLELDSREKSSRVNEEVKSISSKVSDYEHDGVRNQDTDLHQNITGQEVVQRKEDSEGHAVVSTTFGIDGQSFNSIPSSERVREVSPKVHETLVVVEKPKTSLHESGSFQNALSSHQQHLVDDFQPEALIHADASIPSGSTSKDVIPSEDGSFVQQLQSNVSVEVPEHSGGTSKDVLLSDAGSFVQHLPSNVSVGVPEHSGYPSQLLNVAGATGLSSDKRSANEVSGSEPLPFTLPSTQLHSATSSIGPCVASEQPSLHPQGFKELPPISVSSVQIPLHTYPLPAFAGSHFQGENAGHMPQIPRQYGVAQQNALFPFQSPYPPSLQTPNSHFSVPPHSSWTSLPLPPPPPPPSQAVYNSSSNLGVAKSFISSEFNQNQLHSRSDYVSQTSLIHGLPSNSQNSKFEDQPYPPMQDHSQTFVRTEPLSPKHLHQGNPAYQSLSSSTSFGGLHHQPKQFSWESDVNRPQPSLGGRLPPEGNFSTSSHIHPLSQQQQSVHNFQYASSDVNLPGPGGTATVSRYPPDIPDSNHSTSLPAFGPSRVSAHYNPYASTFEQPLSSKFSSSFLRQENDIVYGKNYGPSRYREGDSVGSRHTASPKPAAAVGRILPGSGEQYDPLFDSIEPSSSLKKFDFEQKQEVTGESNFSLRPKSSHMSLDAKEKKHEKVGAVASTSSLNNDEYGETADAEVGAVDNESLSNDVDVANMSPEEDEINQTKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRIPKSQEKISQYIDSSQRKLTKLVMGYVDKYVKV 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 14 58 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 738 777 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 294 313 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1452 1477 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1327 1358 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1402 1416 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 187 212 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1092 1106 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 369 408 - -
Vivi4g01758 1560 ProSiteProfiles Zinc finger C3H1-type profile. 713 740 IPR000571 GO:0046872
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 470 494 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 590 712 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1 58 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1388 1430 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 369 383 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 645 698 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1070 1106 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1193 1216 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1193 1221 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 117 228 - -
Vivi4g01758 1560 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 969 1559 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 590 644 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 153 168 - -
Vivi4g01758 1560 MobiDBLite consensus disorder prediction 1070 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01758 Vivi-Chr4 79349532 79358954 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vivi4g01758 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01758 - - cam:101503336 1998.4