Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01754 ATGGCATTGGAACTTGTAGGTGGAGCTTTCTTAGAGGCTGGCTTTGCTGCTTTGCTTGGAAAGATAGCATATCCTGCAGTAGTTGCATTCTTCCAGAAAAATCAAAGCAGTGTCACGTTGCTCAAGAGGTTGAAGATCTCTTTGTTGTCCATTGATGTTGTGCTCAGTGATGCAGAAGAAAATCAAATAACAAATGCTTATGTGAAAGAATGGATGGAAGAACTCAAAGGTGTTGTCTTTGATGCTGATGATGTAATGGATGAGATTTGTACTTATGCAAAGATAAGTGAGGTAAAAGTCAACAACCCTGATTTTATTACTCCTTTTAATTTGCATGTTGCTGAACTTGAACAGAAAGTAGGAGACATCATTGAAAGATTAGACTTTATCATAAAACAAAAAGATATGCTTCAACTGCAAATGGTTAAAGAAGTTAAAATTCCACCAAAGGTTCCAACTTCATCGGTAGTGGGATCAAGTGATGTGTATGGTAGGGATGATGATAAAGAGGCTTTGATGAAGTTGCTGTTTTCTGATGATCCGGAAGGTGAATGTAATATAAGTGTGATTCCTATAGTTGGTATGGGGGGAATTGGAAAAACCACCTTAGCGAAGTTTGTATACAACGATGAAAGAGTGCAGAGGGAATTTGATATCAAAGCTTGGGTTTACGTGTCTGAGAAGTTTGATGTTATCAAGATTACGAAAACCCTTGTGGAAGAGATCACTTTATGCAGTTGCAGTATTGAAGAGTTGAATTTACTCCAACGAGATTTGAAGAAAAGGTTGTTGAAGAAAAAGTTTTTGATTATCTTAGATGATGTTTGGAATCAAAACTACATTAAATGGGAAACTTTGAAGAATCCGTTTGTGTACGGGGCTCCGGGAAGTAAGATTATAGTAACAACGAGAATTGCTCACGTGGCATCAATTATGCAGACGGTTAAGCCTTATTATCTTTCAGAGCTGAGTGATGATGATTGTTGGATGCTGTTTTCGAAACATGTGTTCGGATATGCAAATTCAAATGCTCATCAGAATTTAAGAAATATCGGTAAAAAGATAATTAAGAAGTGCAAAGGATTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGATCTAAAGATGATACAAAGGAATGGTACAAAGTACTGAACAGTGAGATATGGGATTTGCAGGATGATGAGAGTAACATTCTTCCAGCTTTGAGGTTAAGTTATCATTATCTTCCATCAAATGCGAAGAGATGTTTTGCTTATTGTTCAGTTTTTCCAAAAGATTATGAGTATGAGAAGGAGAAGTTGATCTTACTGTGGATGGCAGAAGGTTTGCTGCAACAACTGAGGAGACACAAGAGAATTGAAGAAGCTGGAGATGAGATCTTTAGTGAACTAGTGTCTAGATCGTTTTTTCAGCAATCGAAACGCAATAAGTCGTGTTTTGTAATGCACCATTTTGTAAATGATTTAGCTCAACTTGTATCTGGAAAATTTTCGGTCAGGGTGGAAGGAAATTATGATCAGGTGGAAGAAAGTGCTCGATATTTGCTGCATTTGATTGCACGTAAATTCCCTGCCGCACATTGGAAGACTATTAGCAAAGCTATTCATCTAAGAACCTTCATGGAATTAAGATTGGTCGATAAATCTGTGAGCTTTATTGATGAGGTTCCACATGACTTGTTGATCAAGCTAAAATGTTTAAGGGTGTTATCTTTGGATGGCATCTATCTTAAAGGGTTGCCTGATTCAGTTACCGAGTTAATACATCTTCGGTATCTAGATCTTTCTGGGGCTAAAATGAACATGTTGTGGGAAAGCATCGGTGGTTTGTACAATTTGGAAACTCTGAAGCTAGTTGGATGTTCTAACCTACAACAACTTCCTAAAGACTTCCATAAGCTGGTTAGCCTGCGTTACTTAGATATTACTCGTACGCGTTTGAAATGGATGCCATTGCATATGAATGCATTGACAAACCTACAAAATCTAAGCGACTTTTTTGCAGGAAAAGAATATGGATCTTCAATTGGTGAGCTAGGAGAATTATCTGATTTACATGGATCATTGTTCATTCACAATTTCGAACACGTTAGCTTTGTGGATTCAGGAAAGGCCGTGTTGAGTAAAAAGGAATTTCTTGAGAAGTTAGTTTTGGAGTGGAACGAGAATGGTGATACTGATAATTCACGGCAAGAAAAAGACATACTAGAGAGGTTAGAACCCCATACAAATCTTAAAGAGCTTTCTATATATAACTATCTAGGGACAGAATTTCCTAATTGGGTGGGAGACTCTTCTTTCTGCAACTTGTTGTTCATGGATCTTAAGGGTAGCAAATACTGCTATAAATTACCTCCACTTGGACAACTTGGTTCTTTGAAAGAGCTACGGATTTCTCAATTCGACGGATTAGTGAGTGTGGGATCTGAGTTTTATGGGGATGCAACTCAGAGCTTTGGCTCCTTAGAAACTCTTAGGATTGAGAACATGTCATCGTGGGAGGAATGGCAGCATCCTAATGAGGCTAACAAAGCTTTTGCAGTACTGAAAGAACTTCATATAAATAGTTGTCCTAGATTGATAAAAGATTTACCTATTAACCTTCCATCTTTGACATTACTTGTCATCAGAGATTGCAAGAAGCTCGTTTCTTCACTTCCAACAACTTCTTCGGCTTTGCGGGTGCTTAACATTGACAACTGTGGGAACTTAAAATTCCCAGCACGTGTTTATCAGTTTCATCAGACACTTACATCCTTTTACATACACAATAGTTTTGATTCACTCAAGCTATTGCCTTTAGATATATTTCCCAAACTCAAGTCCCTGGATGTTTCTGGTTGTAAGAATCTGGAAGCATTTACAGTCTCGGGAATCCGTCGTCCAATTCTTGCATCCCTGCGTTCCTTGTTCATAAGTAACTGTCCAAAGTTGGTAACCTTTCCACTAGAAGGGTTCTTCGCCCCAAAGCTCACGTTGTTGAATATTGACTACTGCGAGGAGCTCAAGTCCCTGCCCCTGAAAATGGATCTGCTTTTGCCAGGCTTGATAGAACTCCAACTGTGGAGATGCCCTCAAATTCAGCCAATTGAGAAGTGGCCATGTGATTTAAGATCAGTCAGAATCTGGAACTGTGACAAACTCATTGCCCGTCACTTAGAGTGGGATCAATCCAATCCTCTCCATTTGACAGACTTTACAATGTCGGGGGCTTTCACTGTCAAATCTGAAGAGTGCTGCTCAACAGTTGCCAGTTCAACTTTTGGCTCTGGTAGGCGAGCACTATCAAGCTCTTCTCAGAAAAAATCATTTTCTAAAATAGTATTCAGATGA 3339 0.3884 MALELVGGAFLEAGFAALLGKIAYPAVVAFFQKNQSSVTLLKRLKISLLSIDVVLSDAEENQITNAYVKEWMEELKGVVFDADDVMDEICTYAKISEVKVNNPDFITPFNLHVAELEQKVGDIIERLDFIIKQKDMLQLQMVKEVKIPPKVPTSSVVGSSDVYGRDDDKEALMKLLFSDDPEGECNISVIPIVGMGGIGKTTLAKFVYNDERVQREFDIKAWVYVSEKFDVIKITKTLVEEITLCSCSIEELNLLQRDLKKRLLKKKFLIILDDVWNQNYIKWETLKNPFVYGAPGSKIIVTTRIAHVASIMQTVKPYYLSELSDDDCWMLFSKHVFGYANSNAHQNLRNIGKKIIKKCKGLPLAVKTLAGLLRSKDDTKEWYKVLNSEIWDLQDDESNILPALRLSYHYLPSNAKRCFAYCSVFPKDYEYEKEKLILLWMAEGLLQQLRRHKRIEEAGDEIFSELVSRSFFQQSKRNKSCFVMHHFVNDLAQLVSGKFSVRVEGNYDQVEESARYLLHLIARKFPAAHWKTISKAIHLRTFMELRLVDKSVSFIDEVPHDLLIKLKCLRVLSLDGIYLKGLPDSVTELIHLRYLDLSGAKMNMLWESIGGLYNLETLKLVGCSNLQQLPKDFHKLVSLRYLDITRTRLKWMPLHMNALTNLQNLSDFFAGKEYGSSIGELGELSDLHGSLFIHNFEHVSFVDSGKAVLSKKEFLEKLVLEWNENGDTDNSRQEKDILERLEPHTNLKELSIYNYLGTEFPNWVGDSSFCNLLFMDLKGSKYCYKLPPLGQLGSLKELRISQFDGLVSVGSEFYGDATQSFGSLETLRIENMSSWEEWQHPNEANKAFAVLKELHINSCPRLIKDLPINLPSLTLLVIRDCKKLVSSLPTTSSALRVLNIDNCGNLKFPARVYQFHQTLTSFYIHNSFDSLKLLPLDIFPKLKSLDVSGCKNLEAFTVSGIRRPILASLRSLFISNCPKLVTFPLEGFFAPKLTLLNIDYCEELKSLPLKMDLLLPGLIELQLWRCPQIQPIEKWPCDLRSVRIWNCDKLIARHLEWDQSNPLHLTDFTMSGAFTVKSEECCSTVASSTFGSGRRALSSSSQKKSFSKIVFR 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01754 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 422 IPR027417 -
Vivi4g01754 1112 Gene3D Ribonuclease Inhibitor 530 926 IPR032675 -
Vivi4g01754 1112 Pfam NB-ARC domain 166 408 IPR002182 GO:0043531
Vivi4g01754 1112 FunFam Probable disease resistance protein At1g63360 408 494 - -
Vivi4g01754 1112 PANTHER DISEASE RESISTANCE PROTEIN RP 41 1026 IPR044974 GO:0006952
Vivi4g01754 1112 Gene3D - 407 494 IPR036388 -
Vivi4g01754 1112 FunFam Probable disease resistance protein At1g61300 146 317 - -
Vivi4g01754 1112 SUPERFAMILY L domain-like 539 953 - -
Vivi4g01754 1112 Gene3D - 36 131 - -
Vivi4g01754 1112 Pfam Rx N-terminal domain 39 97 IPR041118 -
Vivi4g01754 1112 Gene3D - 143 316 IPR027417 -
Vivi4g01754 1112 PRINTS Disease resistance protein signature 189 204 - -
Vivi4g01754 1112 PRINTS Disease resistance protein signature 359 373 - -
Vivi4g01754 1112 PRINTS Disease resistance protein signature 937 953 - -
Vivi4g01754 1112 PRINTS Disease resistance protein signature 262 276 - -
Vivi4g01754 1112 SUPERFAMILY L domain-like 919 1052 - -
Vivi4g01754 1112 Gene3D - 322 406 IPR042197 -
Vivi4g01754 1112 Gene3D Ribonuclease Inhibitor 927 1107 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01754 Vivi-Chr4 79106555 79110878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01754 186 653 WRKY Transcription Factor Family AT5G45050 24.754 1.87e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01754 - - vum:124831962 1141.72