Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01723 ATGGCATTGGAACTCGTAGGTGGAGCTTTCTTAGAGGCTGGCTTTGCTGCTTTGCTTGGAAAGATAGCATATCCTGCAGTAGTTGCATTCTTTAAGAAAAATCAAAGTAGTGTCACCTTGCTCAAGAGGTTGAAGATCTCTTTGTTGTCCATTAATGTTGTGCTCAGTGATGCAGAAGAAAAACAAATAACAAATGGCTATGTGAAAGAATGGATGGAGGAACTCAAAGGTGTTGTCTTTGATGCTGATGATGTAATGGATGAGATTTGTACTTATGCAAAGATAAGTGAGGTTAGAGTCAACAACCATGATTTTATTACTCCTTTTAATTTGCATGATGCTGAACTTGAACAGAAAGTACGAGACATAATTGAAAGATTAGACTTTATCATAAAACAAAAAGATATGCTTCAACTGCAAATGGTTAAAGAAGTTAAAATTCCACCAAAGGTTCCAACTTCATCGGTAGTGGGATCAAGTGATGTGTATGGTAGGGATGATGATAAAGAGGCTTTGATGAAGTTGCTGTTTTCTGATGATCCGGAAGGTGAATGTAATATAAGTGTGATTCCTATAGTTGGTATGGGGGGAATTGGAAAAACCACCTTAGCGAAGCTTGTATACAACGACGAAAGAGTGCAGAGGGAATTCGATATCAAAGCTTGGGTTTACGTGTCTGAGAAGTTTGATGTTATCAAGATTACGAAAACCCTTGTGGAAGAGATCACTTTATGCAGTTGCAGTATTGAAGAGTTGAATTTACTCCAACGAGATTTGAAGAAAAGGTTGTTGAAGAAAAAGTTTTTGATTATCTTAGATGATGTTTGGAATCAAAACTACATTAAATGGGAAACTTTGAAGAATCCGTTTGTGTACGGGGCTCCGGGAAGTAAGATTATAGTAACAACGAGAATTGCTCACGTGGCATCAATTATGCAGACGGTTAAGCCTTATTATCTTTCAGAGCTGAGTGATGATGATTGTTGGATGCTGTTTTCGAAACATGTGTTCGGATATGCAAATTCAAATGCTCATCAGAATTTAAGAAATATCGGTAAAAAGATAATTAAGAAGTGCAAAGGATTGCCTTTGGCTGTGAAGACACTTGCAGGACTTTTGAGATCTAAAGATGATACAAAGGAATGGTACAAAGTACTGAACAGTGAGATATGGGATTTGCAGGATGATGAGAGTAACATTCTTCCAGCTTTGAGGTTAAGTTATCATTATCTTCCATCAAATGCGAAGAGATGTTTTGCTTATTGTTCAGTTTTTCCAAAAGATTATGAGTATGAGAAGGAGAAGTTGATCTTACTGTGGATGGCAGAAGGTTTGCTGCAACAACTGAGGAGACACAAGAGAATTGAAGAAGCTGGAGATGAGATCTTTAGTGAACTAGTGTCTAGATCGTTTTTTCAGCAATCGAAACGCAATAAGTCGTGTTTTGTAATGCACCATTTTGTAAATGATTTAGCTCAATTTGTATCTGGAAAATTTTCTGTCAGAGTGGAAGGAAATTATGATGAAGTGGAAGAAAGTGCTCGATATTTGCTGCATTTGATTGCACGTAAATTCCCTGCCGCACATTGGAAGACTATTAGCAAAGCTATTCATCTAAGAACCTTCATGGAACTAAGATTGGTCGATAAATCTGTGAGCTTTATTGATGAGGTTCCACATGACTTGTTGATCAAGCTAAAATGTTTAAGGGTGCTGTCTTTGGAAGGCATCTATCTTAGAGGGTTGCCTGATTCAGTTACCGAGTTAATACATCTTCGGTATCTAGATCTTTCTGGGGCTAAAATGAACATGTTGTGGGAAAGCATCGGTGGTTTGTACAATTTGGAAACTCTGAAGCTAGTTGGATGTTCTAACCTACAACAACTTCCTAAAGACTTCCATAAGCTGGTTAGCCTGCGTTACTTAGATATTACTCGTACGCGTTTGAAATGGATGCCATTGCATATGAATGCATTGACAAACCTACAAAATCTAAGCGACTTTTTTGCAGGAAAAGAATATGGATCTTCAATTGGTGAGCTAGGAGAATTATCTGATTTACATGGATCATTGTTCATTCACAATTTCGAACACGTTAGCTTTGTGGATTCAGGAAAGGCCGTGTTGAGTAAAAAGGAATTTCTTGAGAAGTTAGTTTTGGAGTGGAACGAGAATGGTGATACTGATAATTCACGGCAAGAAAAAGACATACTAGAGAGGTTAGAACCCCATACAAATCTTAAAGAGCTTTCTATATATAACTATCTAGGGACAGAATTTCCTAATTGGGTGGGAGACTCTTCTTTCTGCAACTTGTTGTTCATGGATCTTAAGGGTAGCAAATACTGCTATAAATTACCTCCACTTGGACAACTTGGTTCTTTGAAAGAGCTACGGATTTCTCAATTCGACGGATTAGTGAGTGTGGGATCTGAGTTTTATGGGGATGCAACTCAGAGCTTTGGCTCCTTAGAAACTCTTAGGATTGAGAACATGTCATCGTGGGAGGAATGGCAGCATCCTAATGAGGCTAACAAAGCTTTTGCAGTACTGAAAGAACTTCATATAAATAGTTGTCCTAGATTGATAAAAGATTTACCTATTAACCTTCCATCTTTGACATTACTTGTCATCAGAGATTGCAAGAAGCTCGTTTCTTCACTTCCAACAACTTCTTCGGCTTTGCGGGTGCTTAACATTGACAACTGTGGGAACTTAAAATTCCCGACACGTGTTTATCAGTTTCATCAGACACTTACATCCTTGTACTTACACAATAGTTTTGATTCACTCGTGCTATTGCCTTTAGATATATTTCCCAAACTCAAGTCCCTGGATGTTTCTGGTTGTAAGAATCTGGAAGCATTTACAGTCTCGGGGACAATGAGAATCCGTCGTCCAATTCTTGCATCCCTGCGTTCCTTGTTCATAAGTAACTGTCCAAAGTTGGTAACCTTTCCAATAGAAGGGTTCTTCGCCCCAAAGCTCGCGTTGTTGAATATTGACTACTGCGAGGAGCTCAAGTCCCTGCCCCTGAAAATGGATCTGCTTTTGCCAGGCTTGATAGAACTCCAACTGTGGAGATGCCCTCAAATTCAGCCAATTGAGAAGTGGCCATGTGATTTAAGATCAGTCAGAATCTGGAACTGTGACAAACTCATTGCCCGTCACTTAGAGTGGGATCAATCCAATCCTCTCCATTTGACAGACTTTACAATGTCGGGGGCTTTCACTGTCAAATCTGAAGAGTGCTGCTCAACAGTTGCCAGTTCAACTTTTGGCTCTGGTAGGCGAGCACTATCAAGCTCTTCTCAGAAAAAATCATTTTCTAAAATAGTATTCAGATGA 3348 0.3895 MALELVGGAFLEAGFAALLGKIAYPAVVAFFKKNQSSVTLLKRLKISLLSINVVLSDAEEKQITNGYVKEWMEELKGVVFDADDVMDEICTYAKISEVRVNNHDFITPFNLHDAELEQKVRDIIERLDFIIKQKDMLQLQMVKEVKIPPKVPTSSVVGSSDVYGRDDDKEALMKLLFSDDPEGECNISVIPIVGMGGIGKTTLAKLVYNDERVQREFDIKAWVYVSEKFDVIKITKTLVEEITLCSCSIEELNLLQRDLKKRLLKKKFLIILDDVWNQNYIKWETLKNPFVYGAPGSKIIVTTRIAHVASIMQTVKPYYLSELSDDDCWMLFSKHVFGYANSNAHQNLRNIGKKIIKKCKGLPLAVKTLAGLLRSKDDTKEWYKVLNSEIWDLQDDESNILPALRLSYHYLPSNAKRCFAYCSVFPKDYEYEKEKLILLWMAEGLLQQLRRHKRIEEAGDEIFSELVSRSFFQQSKRNKSCFVMHHFVNDLAQFVSGKFSVRVEGNYDEVEESARYLLHLIARKFPAAHWKTISKAIHLRTFMELRLVDKSVSFIDEVPHDLLIKLKCLRVLSLEGIYLRGLPDSVTELIHLRYLDLSGAKMNMLWESIGGLYNLETLKLVGCSNLQQLPKDFHKLVSLRYLDITRTRLKWMPLHMNALTNLQNLSDFFAGKEYGSSIGELGELSDLHGSLFIHNFEHVSFVDSGKAVLSKKEFLEKLVLEWNENGDTDNSRQEKDILERLEPHTNLKELSIYNYLGTEFPNWVGDSSFCNLLFMDLKGSKYCYKLPPLGQLGSLKELRISQFDGLVSVGSEFYGDATQSFGSLETLRIENMSSWEEWQHPNEANKAFAVLKELHINSCPRLIKDLPINLPSLTLLVIRDCKKLVSSLPTTSSALRVLNIDNCGNLKFPTRVYQFHQTLTSLYLHNSFDSLVLLPLDIFPKLKSLDVSGCKNLEAFTVSGTMRIRRPILASLRSLFISNCPKLVTFPIEGFFAPKLALLNIDYCEELKSLPLKMDLLLPGLIELQLWRCPQIQPIEKWPCDLRSVRIWNCDKLIARHLEWDQSNPLHLTDFTMSGAFTVKSEECCSTVASSTFGSGRRALSSSSQKKSFSKIVFR 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01723 1115 Gene3D - 407 494 IPR036388 -
Vivi4g01723 1115 Pfam NB-ARC domain 166 408 IPR002182 GO:0043531
Vivi4g01723 1115 Gene3D Ribonuclease Inhibitor 866 1017 IPR032675 -
Vivi4g01723 1115 Gene3D Ribonuclease Inhibitor 672 865 IPR032675 -
Vivi4g01723 1115 Gene3D - 142 316 IPR027417 -
Vivi4g01723 1115 Gene3D - 322 406 IPR042197 -
Vivi4g01723 1115 SUPERFAMILY RNI-like 918 1052 - -
Vivi4g01723 1115 SUPERFAMILY L domain-like 539 954 - -
Vivi4g01723 1115 FunFam Probable disease resistance protein At1g61300 146 317 - -
Vivi4g01723 1115 Pfam Rx N-terminal domain 38 97 IPR041118 -
Vivi4g01723 1115 Gene3D Ribonuclease Inhibitor 509 669 IPR032675 -
Vivi4g01723 1115 PANTHER DISEASE RESISTANCE PROTEIN RP 41 859 IPR044974 GO:0006952
Vivi4g01723 1115 Gene3D - 35 134 - -
Vivi4g01723 1115 FunFam Probable disease resistance protein At1g63360 408 494 - -
Vivi4g01723 1115 PRINTS Disease resistance protein signature 262 276 - -
Vivi4g01723 1115 PRINTS Disease resistance protein signature 189 204 - -
Vivi4g01723 1115 PRINTS Disease resistance protein signature 359 373 - -
Vivi4g01723 1115 PRINTS Disease resistance protein signature 937 953 - -
Vivi4g01723 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 422 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01723 Vivi-Chr4 75537398 75541206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01723 186 653 WRKY Transcription Factor Family AT5G45050 23.352 9.82e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01723 - - vum:124831962 1155.58