Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01714 ATGCAGAATTTCTATAGGGCTTTTCTGAAACAAACTCAACAGGCTGATTGGAGGGGGCTGATGGTGAACAATTATGCTCGTCCTAGGGCTGTTTTCACATTGTGGCTAGCATGCCACAAGAGACTTGCAACAAAAGAAAGATTGGAGAAATTTGGTGTGCATGTGGATCTGAAATGTATGTTTTGTGACTGTATTGAAAATATTCAACACCTTTTATTCGATTGTAGGTACACTAAGGATGTTTGGAGCAAGATTTTGCAATGGCTTAATGTGAAACATGAGGCTAGGGGATGGGAGCAGGAATTATCTTGGCTGAACACAGTTTGTAGAAGCAAGAACTGGCGCACTAGCAGTGTGAAGACAGCAGTAGCAGAAACTGTATATGCTATTTGGATACAAAGGAATGCAATGGTGTTTCAAAAGGAGTATAGAGATACATACATAGTACAAAAAATCATAGATACTACTGTAAATAGAATTTGGATATTACTTTCATGCATTTGCTATTGTTTCTACACTATCACTCAACCATTTTCTGTTTTACAAGATACGGTTTCAGATACGCGCACGATGTCTAGGGCTCCCATTCTCATTAAGGAGCTGGTCCAAGGGAACCAGGTGTGGAAAATGCACATCAGGGTCGTTGACCTGTGGGTTGTTACAGAAAAAACAGGGTATCAACACCTAGAGTTGGTTCTACAAGATGGAACGGGTGACCAAATCCATGTGACCACTAGCCGTTGGGATTTTAAAGATTGGATAGAGCAGATCAAAGAGCATGAAACTTATTATCTGTATAATGGGGAGCCTGTGGTTAATGATGGCCCTTTGAAAGTATGTTCGAACCCTCTTAAGATTCTTTTTAATGGAGGGACTACTCTCACCAAGGTGGACATACCGGACATCCCACCACACAAATTCAACTTCCATGCCATTGAAAACTTTCTCAATGGACATTTCAAGCCTGATATGCTCTATGATGTTATTGGTGTCTTGCAAGATGTTGTTAAGACACAAATGGGGGGTGGGGGTAAGAAGTCCTGTACCAATATCACATTACGTGACGTTGTAGGAAATGCCATTGAAGTTGCTTTATGGGGTGATTTTAGCAAACAATTCATGGACTACAAGACTCTTGGCAAACATGTTGGTCCCACAATTATCATTTTGACTCATGCTTGGTGTAAGCCCAATACAGTATCTGAATTACCAAGTCTATCTAATGCTTGGAATGGCTCGAAACTCCTGATTAACTTAGACCATCCACAAGTGGAAACCTTCAAAACCAGTTTTGGAGCAGCTGATTTGTCAAATGCATCCAACCTTTCTCTATCACTAACTTGTGATTCATCCATTCAATCCACAAACCAGAATTGGACTAGCCATAATGAGGTCAGGACTATCCGTGACATTTATGAAGGAGAAAAGGATTGTTTTGCAACTACCATTGGAAATACCAAACGATTCAAGGCTTCAAGGTTTGGATGGTTTTTTAAGTGTTGCCCAGGATGTAAGATTTCTATCAAGACCGTTGGAGGGAAAGTTGAGTGTCACTGTGGAGTTAAAGATGTTGAACCAATTACTAAATTCAAAATAGAAGTTGAAGTTGAATATGATGGCTTTAATGGAACCTTTGTCTTTTGGGATAAGGATTGTGTCCCATATACTAAACTGTCTGCTAAAGAGTTAAGAAAGCTCATGATAGCGAATGGAGAAGACAACCCAAAAATATGGCCGGCTCAAGTTGACAATTTGTTGAATAAGGAAATGGCGTTCCGTATCAAATTTCAATCATCTTACAAACAGTATTCAATTGTGACAATTCTTAATGAGGATAATGTTTACAACAAACTTAAGGGCTACCTAACCCCGGATGAGGAGCATACATCAAATGCTCCTGTTTTGGAGATCTCCAATTCTGATCCAAATCATGAGCCAACTGAACCTATTATGACACTTTCTGCTCAAGCTTCGATATCTCCTCAACCTTCGTCTGCAAGCTCCGGCAGCACACCTGCCAAGAGGGGAGCTATTTCAACATCAGTTAATGAGTTGATTGAGGCTGAAGATCTGACTCCTAAACAATCTGCTACTAAGGCTAAGACTGCAAGAAAGATCAAGCATATCAAGAAGGAGTAA 2139 0.4016 MQNFYRAFLKQTQQADWRGLMVNNYARPRAVFTLWLACHKRLATKERLEKFGVHVDLKCMFCDCIENIQHLLFDCRYTKDVWSKILQWLNVKHEARGWEQELSWLNTVCRSKNWRTSSVKTAVAETVYAIWIQRNAMVFQKEYRDTYIVQKIIDTTVNRIWILLSCICYCFYTITQPFSVLQDTVSDTRTMSRAPILIKELVQGNQVWKMHIRVVDLWVVTEKTGYQHLELVLQDGTGDQIHVTTSRWDFKDWIEQIKEHETYYLYNGEPVVNDGPLKVCSNPLKILFNGGTTLTKVDIPDIPPHKFNFHAIENFLNGHFKPDMLYDVIGVLQDVVKTQMGGGGKKSCTNITLRDVVGNAIEVALWGDFSKQFMDYKTLGKHVGPTIIILTHAWCKPNTVSELPSLSNAWNGSKLLINLDHPQVETFKTSFGAADLSNASNLSLSLTCDSSIQSTNQNWTSHNEVRTIRDIYEGEKDCFATTIGNTKRFKASRFGWFFKCCPGCKISIKTVGGKVECHCGVKDVEPITKFKIEVEVEYDGFNGTFVFWDKDCVPYTKLSAKELRKLMIANGEDNPKIWPAQVDNLLNKEMAFRIKFQSSYKQYSIVTILNEDNVYNKLKGYLTPDEEHTSNAPVLEISNSDPNHEPTEPIMTLSAQASISPQPSSASSGSTPAKRGAISTSVNELIEAEDLTPKQSATKAKTARKIKHIKKE 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01714 712 Gene3D - 196 298 IPR012340 -
Vivi4g01714 712 Pfam zinc-binding in reverse transcriptase 2 82 IPR026960 -
Vivi4g01714 712 CDD RPA1_DBD_A_like 209 293 - -
Vivi4g01714 712 Gene3D - 447 621 IPR012340 -
Vivi4g01714 712 CDD RPA1_DBD_B_like 327 431 - -
Vivi4g01714 712 Gene3D - 300 440 IPR012340 -
Vivi4g01714 712 MobiDBLite consensus disorder prediction 632 678 - -
Vivi4g01714 712 SUPERFAMILY Nucleic acid-binding proteins 307 432 IPR012340 -
Vivi4g01714 712 SUPERFAMILY Nucleic acid-binding proteins 197 297 IPR012340 -
Vivi4g01714 712 SUPERFAMILY Nucleic acid-binding proteins 464 608 IPR012340 -
Vivi4g01714 712 MobiDBLite consensus disorder prediction 626 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01714 Vivi-Chr4 75014480 75019136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01714 302 466 Core DNA Replication Machinery Family AT2G06510 28.324 8.79e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01714 - - vvo:131597380 1445.25