Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01703 ATGAAAACAGAGGTTGGTGATCAATTGGGCATATATATGGAATATGTCAATCCTGGATCACTTCAAAAGTTTATGCAAGAACATAATGGGGCTCTGACAGAATCAGTGGTTCGCAATTTTACACGGCATATTCTCTCTGGAGTGGTGTGCTTACATAGCACCGAGACTTTCCCCAGGGACGTTAAAGGTGCAAACTTGCTAGTTGATCCATCAGGCATTGTCAAGCTTGCAGGTTTTGGGGTGTCAAAAACTGTTGTAACACTGTTTGGTATGCCTCATAGTTACTGA 288 0.4236 MKTEVGDQLGIYMEYVNPGSLQKFMQEHNGALTESVVRNFTRHILSGVVCLHSTETFPRDVKGANLLVDPSGIVKLAGFGVSKTVVTLFGMPHSY 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01703 95 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g01703 95 Pfam Protein kinase domain 7 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi4g01703 95 Gene3D Transferase(Phosphotransferase) domain 1 2 93 - -
Vivi4g01703 95 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 5 85 - -
Vivi4g01703 95 SUPERFAMILY Protein kinase-like (PK-like) 6 87 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01703 Vivi-Chr4 73987110 73990668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01703 5 83 MAP Kinase Kinase Kinase AT5G66850 63.291 1.10e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi4g01703 Pkinase 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01703 - - vvo:131599255 194.512