Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01648 ATGGTGGGTGGTGGTAGAAGTAGGAGAAAGAGGAAGCAGTCAAGCAGAATCCATGCATTCTCAATTGGGAAAGCTTCATTCAAAGGTGAACATTCACTCATAGGAGGACCGGGCTTCTCAACAATAGTTTACTGCAAAGAACCAGAAAGTGGTAGTGATATTGTGAATTATGGTGACAATTATGTCAGAACTACTAAATATACAGCCTTCACTTTCATTCCCAAATCCTTGTTTGAGCAATTTAGAAGGGTTGCCAATTTTTACTTCCTTGTTTGTGCAATCTTGTCTTTTTTTCCTGTCTCTCCTTACTCAGCTGTTAGCAATGTTGTTCCTCTTGTCGTTGTTGTTGCTGCTACAATTGGGAAAGAGGCTGTTGAGGATTGGAGACGATTGAAGCTGGATATTGAAATGAATAACAGAAAGGTTAAAGTCCATAATGGAGAGGGTGTTTTCGACTACTCTAAATGGCGTGATTTGAAGGTTGGAGACATAGTGAAAGTAGAAAAAGATGAATTTTTCCCTGCTGATCTTATCCTAATATCATCAAGCTATGAAGATGCTATCTGCTACGTTGAGACCGTGAATCTTGATGGAGAAACAAATCTTAAACTCAAACAAGCACTGGAAGAAACTTCCAAGTTTCAAGAAGACTCTACATTCCAAAATTTCACAGCTATTATCAAATGTGAGGATCCAAATGCATATCTATACTCATTCATAGGCAATATAATGATTGAAGATCAACTATATCCGCTTGCGCCTCAGCAGTTACTGCTTAGGGACTCAAAGCTTAGGAACACAGATTTTATATACGGTGCGGTAATCTTTACCGGCCATGATACGAAGGTTATGCAGAACTCCATGGACCCTCCTTCGAAGAGAAGCAAAGTTGAGAAGCAAATGGATAAGATAATCTACTTTCTGTTCTTAGTTTTGTTTTTTATTTCTTTTATCGGTTCGGTATTCTTTGGCATTGCGACAAGTGAAGATCTTGAAACTGGAGTAATGAAGAGATGCTACCTAAGACCGGATGATACTACAATCTACTACGATCCAAAGAAGGCTCCGGTTGCAGCAATGCTGCATTTCTTGACAGCACTAATGTTGTATAGTTACTTGATTCCAATTTCTTTGTATGTCTCCATTGAAATTGTGAAAGTACTTCAAAGCATGTTTGTCAACCACGATATACACATGTATTACGAGGAAACTAACCAGCCTGCACATGCCCGTACCTCGAATTTAAATGAAGAACTTGGCCAAGTTGATACTATTCTTTCGGATAAAACAGGAACTTTGACTTGCAATTCCATGGAATTTGTCAAGTGTTCGATTGCTGGGATTGCATATGGACAAGGTATTACCGAAGTTGAGAGAGTTCTAGAAAGGAGTAAAGGATTACCATTAAGTCAAGAGTTGACAGAAGATGGAAATGTTGCTGAGATTTCTGAAGCAAAGCCATCCTCCATTAAAGGTTTTAACTTCATGGATGAAAGGATTATGAATGGAAATTGGGTAAAGGAACCTCACGCCAATGTAATCCAGAACTTCTTGCGGTTGTTGGCTGTATGTCATACTGCAATACCTGAAGTTGATGAAGAAAATGGCAATGTTTCATATGAAGCTGAATCACCTGATGAGGCAGCTTTTGTAATTGCAGCTAAAGAGCTTGGATTTGAGTTTAATGAAAGGACTCAAACTACTATTTCTCTGCGCGAGTTCGATTCGATATCAGGCAGGATCATTAGAAGGTCCTACAAACTTTTAAATATATTAGAGTTTAGTAGTGCAAGAAAACGGATGTCTGTTATTGTAAGAGATGAAGAAGAGAAACTACTACTTCTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACGACTTGCAAAGAATGGAAGGGAGTTTGAGAAAAAGACTAAGCAGCACATAAACGAATATGCGGATGCAGGTTTGAGGACCTTGATACTGGCCTATCGTGAACTTGATGAAGAAGAGTACACTCTTTTTAATAAAGAATTGATGGAAGCCAAGAGCTTAGTAAGTGAAGATCGGGAGCAGATTGTGGAGGATGTATCAGAAAAGATTGAAAAGGATTTAATTCTTCTGGGTGCTACTGCAGTTGAAGACAAACTTCAAAACGGGGTTCCTGAATGTATTGACAAGCTAGCACAGGCAGGAATAAAGTTATGGGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATGTCGGGTTTGCTTGTAGTTTACTTCGGCAAGGAATGAAGCAAATTATCATTAGTTCAGACACTCCAGAAACCAAATCTCTTGAGAAAATGGAAAACAAGTCTGGTGCTGATGTGGCAATTAAGAAAAGTGTTCTTTTTCAATTAATGGAAGGAAAGGAATTACTCGGTGCATCAATTGAAAACCCTGAGGCATTAGCTCTAATAATTGATGGGAAGTCTCTGAGATATGCACTAGAAGATGATGTGAAGGACTTGTTTCTTGCACTTGCAGTTGGTTGCGCATCTGTTATATGCTGTCGTTCTTCTCCGAAGCAAAAAGCACTTGTTACTAGATTAGTAAAGATTAAAACAGGTTGTACTACTCTTGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTCCAAGAAGCAGATATTGGGATTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCTCAATTCCGGTATCTAGAGCGTTTACTTCTCGTGCATGGACATTGGTGTTACAGAAGAATCTCATTAATGATCTGTTACTTCTTTTACAAGAATATTGCCTTTGGCTTTACTCTATTCTTGTACGAGATTTATGCCTCATTCTCCGGGCAAGTTGCATATAATGATTGGTTCCTGTCACTATATAATGTATTCTTCACTTCCCTTCCTGTAATTGCCTTGGGAGTATTTGACCAAGATGTCTCTGCTAGATTATGCCTTAAGTTTCCTTTATTATATCAAGAAAGTGTACAAAATGTTCTCTTTAGCTGGAAAAGGATTCTTGGTTGGACATTTAATGGAGTAATGAGTGCAACCATAATATTTTTCTTTTGCATTAATGCAATGGAGAATCAAGCATTCCGAAAAGGAGGCGAAGTAGTTGGACTTGAAGTTCTTGGTGCAACCATGTACACTTGTGTTGTTTGGGTGGTAAATTTTCAAATGGCATTAGCCATAACTTACTTCACTTACATACAACATATATTCATTTGGGGTGGCATTCTTTTTTGGTATATTTTCCTTTTAACATATGGAACTATTAACCCTTCTTTATCAACCACTGCTTATAAAGTTCTTATTGAAGCTTGTGCACCTGCTCCATCTTATTGGCTCATCACTCTCCTTGTTCTTGTTGCTTCACTCCTTCCATATCTTGTATACGCTTCAATCCAAATGCAGTTCTTTCCTATGTTTCATCAAATGATAAAGTGGATGTCCGGTGACGGACATGCAACTGATAATGTACGGCAGCGATCAATACGACATGCAACATTCGGGTTCACGGCTCGTTTCAAAGCATCCAAGTCTTCTCATGTATGA 3561 0.3864 MVGGGRSRRKRKQSSRIHAFSIGKASFKGEHSLIGGPGFSTIVYCKEPESGSDIVNYGDNYVRTTKYTAFTFIPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAATIGKEAVEDWRRLKLDIEMNNRKVKVHNGEGVFDYSKWRDLKVGDIVKVEKDEFFPADLILISSSYEDAICYVETVNLDGETNLKLKQALEETSKFQEDSTFQNFTAIIKCEDPNAYLYSFIGNIMIEDQLYPLAPQQLLLRDSKLRNTDFIYGAVIFTGHDTKVMQNSMDPPSKRSKVEKQMDKIIYFLFLVLFFISFIGSVFFGIATSEDLETGVMKRCYLRPDDTTIYYDPKKAPVAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSMFVNHDIHMYYEETNQPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGQGITEVERVLERSKGLPLSQELTEDGNVAEISEAKPSSIKGFNFMDERIMNGNWVKEPHANVIQNFLRLLAVCHTAIPEVDEENGNVSYEAESPDEAAFVIAAKELGFEFNERTQTTISLREFDSISGRIIRRSYKLLNILEFSSARKRMSVIVRDEEEKLLLLSKGADSVMFERLAKNGREFEKKTKQHINEYADAGLRTLILAYRELDEEEYTLFNKELMEAKSLVSEDREQIVEDVSEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINVGFACSLLRQGMKQIIISSDTPETKSLEKMENKSGADVAIKKSVLFQLMEGKELLGASIENPEALALIIDGKSLRYALEDDVKDLFLALAVGCASVICCRSSPKQKALVTRLVKIKTGCTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISLMICYFFYKNIAFGFTLFLYEIYASFSGQVAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQESVQNVLFSWKRILGWTFNGVMSATIIFFFCINAMENQAFRKGGEVVGLEVLGATMYTCVVWVVNFQMALAITYFTYIQHIFIWGGILFWYIFLLTYGTINPSLSTTAYKVLIEACAPAPSYWLITLLVLVASLLPYLVYASIQMQFFPMFHQMIKWMSGDGHATDNVRQRSIRHATFGFTARFKASKSSHV 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01648 1186 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Vivi4g01648 1186 Gene3D - 541 701 IPR023299 GO:0000166
Vivi4g01648 1186 FunFam Phospholipid-transporting ATPase 701 905 - -
Vivi4g01648 1186 Pfam Phospholipid-translocating ATPase N-terminal 43 107 IPR032631 -
Vivi4g01648 1186 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Vivi4g01648 1186 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Vivi4g01648 1186 PRINTS P-type cation-transporting ATPase superfamily signature 751 761 - -
Vivi4g01648 1186 FunFam Phospholipid-transporting ATPase 543 701 - -
Vivi4g01648 1186 FunFam Phospholipid-transporting ATPase 118 288 - -
Vivi4g01648 1186 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Vivi4g01648 1186 SUPERFAMILY Calcium ATPase, transduction domain A 146 285 IPR008250 -
Vivi4g01648 1186 Pfam Cation transport ATPase (P-type) 524 627 - -
Vivi4g01648 1186 Gene3D - 117 288 - -
Vivi4g01648 1186 Gene3D - 702 905 IPR023214 -
Vivi4g01648 1186 CDD P-type_ATPase_APLT_Dnf-like 59 1025 - -
Vivi4g01648 1186 SFLD p-type atpase 408 916 IPR044492 -
Vivi4g01648 1186 NCBIfam phospholipid-translocating P-type ATPase 57 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi4g01648 1186 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1142 IPR023298 -
Vivi4g01648 1186 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 703 IPR023299 GO:0000166
Vivi4g01648 1186 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 21 1153 - -
Vivi4g01648 1186 NCBIfam HAD-IC family P-type ATPase 829 948 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi4g01648 1186 SUPERFAMILY HAD-like 421 920 IPR036412 -
Vivi4g01648 1186 SFLD C1.7: P-type atpase like 408 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01648 Vivi-Chr4 68469705 68477200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01648 1 1184 Primary Pumps ATPases AT1G68710 68.852 0.0 1735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01648 K01530 - gmx:100797039 1972.59