LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi4g01623	ATGGACACTCGACGCGCCTCACGGGTCGTTACCGACCCCAAAGTAAGGCGCGTTGGTTTCTTTGCTCACCCCGAACCCGATTCCCCGCCACTTACGGACTCTCCACAATCCGACCCGATATCCCCCGTCATTATTCCGCCTCCACGTCAGCTTACCGAACGAACCGCTGCCGTACCCGTTCCCGATTCCAAGTTCCGACGCCAGGAACTCGACGATCAGGTGCCGGTTGGGAGCTACAATCCCTCACAATCGTTGCTTGGAACCTCGCCCACGGATTCGATTTCTTCTAGCAGTGCCGGGTTCATTAACGGAGAGTTCTCTGAGGATCGCTCTGGTGTTGGATGGTTTCGTGGCAGCGAGTTAAGTTTCCCTGGCGGAGGGTTGGATTTGCCGCGTGAAATTTTGGCGGAAAATATCTTTCCTGCTGTAGCGGTGACTGTGAAAAATCTTCCAGGAGATACTGAGAAGAGAGAAGAGGCTGTTAAAGAAGTATACCCTGATCCACTGTCAGTTTCAAAGCCATTGAAAGAAAAAACTTCAAAGGCTGAAAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTGCTTCTAAAGCTAATGGAAGTTCTGCAGTTGCTGAATCTGGCAAAGCCGCCCTAACTAAAAGTAAAAAGCAGTCTTCACAAAAGAAAGATGGTCCTCCAGTTACATCGTCAGTCACTATTGATAACAAATCTGGGAATCGTCCTTTGGAGAAAGAGAGGAAAAAAGAGGCCCCTCCTCAACAATTGCAATATGATGATCAAAACAGAGTGGAAAAAGCTAAAAGGCGTGCACTGGTAAATCAAACTGAAGCAAGAAACAGAGTTGAATTGTTTCGGCATTTGCCTCAATATGAACATGGGGCTCAGGTTCCTAATCTTGAGTCAAAACTTTTCCAACTTGACTCCGTGCATCCTGCTGTGTTCAAGGTCGGATTACGTTATATGGCCGGAGATATAGCAGGGGTTAATGCTCGTTGTATCGAAATGCTTAAAGCACTTCAGGAAGCTATTATAGACTACTCCACTCCACCTGAAAAAGTACTTATTAGAGATTTAACTGCAAAAATCAGTAGTTATATTTCATTTATTAGTGAATGCAGACCACTTTCTATCAGCATGGGAAATGCAATTAGGTTTGTGAAGAGTCGAATAGCCAGGTTGCCCTTGAGTCATACTGATGCTGAGGCAAAAGCAGCACTTTGTTCTGATATTGACCGATTCATTTATGAAAAAATAATTGTTGCGGAAAAGGTTATTATTGGACACGCCAATGCCAAAGTAAGGGATGGAGATGTTCTTCTTACATATGGACTGTCTTGTGTTGTTGAGATGATTCTCATATCTGCCCACGATCTTGGGAAACAATTCCGAGTTGTGGTGGTAGATTCAAGGCCCAAGTTTGAAAGTCAGGCCTTACTTACTAGGCTTATGGCCAAGGGTCTGAGTTGCACGTATACTCATATAAATGCTGTTTCGTATATTATGCATGAGGTCACAAAAGTTTTTCTGGGAGCTTCTGCTATTCTTTCTAATGGAACTGTACTTTCAAGGATTGGGACAGCATGTATTGCAATGGTGGCTCATGAATTTCGTGTTCCTGTATTAATCTGTTGTGAAACTTTTAAGTTTCATGAAAGAGTGCTACTTGATTCAATAGGTTGCAATGAAATAGGTGACCCTGGTGCTGTTGCCACAGTTCCTGGAAGAATGGATATCAATTATCTTAACAATTGGGCAAATGAAAAGAATTTGCAGCTTTTGAATTTAATGTATGATGTTACTCCTTCAGATTATGTCTCAGTTATTGTTACGGAGCATGGAATGATCCCTCCTACAAGTGTGCCTGTGATCGTGCGTGAGTATGGACAAGAGCATTATTTGATATAG	1914	0.4373	MDTRRASRVVTDPKVRRVGFFAHPEPDSPPLTDSPQSDPISPVIIPPPRQLTERTAAVPVPDSKFRRQELDDQVPVGSYNPSQSLLGTSPTDSISSSSAGFINGEFSEDRSGVGWFRGSELSFPGGGLDLPREILAENIFPAVAVTVKNLPGDTEKREEAVKEVYPDPLSVSKPLKEKTSKAERRALQEAQRAAKAASKANGSSAVAESGKAALTKSKKQSSQKKDGPPVTSSVTIDNKSGNRPLEKERKKEAPPQQLQYDDQNRVEKAKRRALVNQTEARNRVELFRHLPQYEHGAQVPNLESKLFQLDSVHPAVFKVGLRYMAGDIAGVNARCIEMLKALQEAIIDYSTPPEKVLIRDLTAKISSYISFISECRPLSISMGNAIRFVKSRIARLPLSHTDAEAKAALCSDIDRFIYEKIIVAEKVIIGHANAKVRDGDVLLTYGLSCVVEMILISAHDLGKQFRVVVVDSRPKFESQALLTRLMAKGLSCTYTHINAVSYIMHEVTKVFLGASAILSNGTVLSRIGTACIAMVAHEFRVPVLICCETFKFHERVLLDSIGCNEIGDPGAVATVPGRMDINYLNNWANEKNLQLLNLMYDVTPSDYVSVIVTEHGMIPPTSVPVIVREYGQEHYLI	637

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	28	46	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	17	100	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	75	100	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	174	190	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	224	240	-	-
	Vivi4g01623	637	Coils	Coil	180	200	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	149	269	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	202	217	-	-
	Vivi4g01623	637	Gene3D	-	423	630	IPR042529	-
	Vivi4g01623	637	Pfam	Initiation factor 2 subunit family	328	620	IPR000649	GO:0044237
	Vivi4g01623	637	PANTHER	TRANSLATION INITIATION FACTOR EIF-2B	36	634	-	-
	Vivi4g01623	637	MobiDBLite	consensus disorder prediction	241	256	-	-
	Vivi4g01623	637	SUPERFAMILY	NagB/RpiA/CoA transferase-like	324	630	IPR037171	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi4g01623	Vivi-Chr4	66354945	66362637	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi4g01623	1	637	Eukaryotic Initiation Factors Gene Family	AT5G38640	55.060	0.0	667