Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01604 ATGGGAACCTCTGAAAACGCCGTCAGTGGGGGCCGAGGCACCACCGTCCCCAAAGAGGTCGACTATGCCAATTATTTCTGCACCTACTCCTTCCTCTACCACCAAAAAGAGATGCTTTCTGATCGTGTTCGCATGGATGCTTACTTCAATGCCGTTTTTGAAAACAAACATCACTTTAAGGACAAGGTTGTTTTGGATGTGGGAGCTGGAAGTGGTATTCTTGCTATATGGTCAGCACAGGCTGGTGCAAAGAAGGTCTATGCTGTGGAAGCTACTAAGATGTCCGAACACGCCCGCGCACTTGTCAAAGCAAATAATCTTGAAAATGTAGTTGAAGTCATTGAGGGCTCCATGGAGGACATTACCTTACCGGAGAAAGTTGATGTCATCATATCTGAATGGATGGGCTATTTTCTTCTGCGAGAATCTATGTTTGATTCTGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGAGTCATGTATCCCAGTCATGCTCGCATGTGGATGGCACCTATCCGGACTGGGATAGTAGAACAAAAATTGGATGATTACCAGTCATCTATGGGTGATTGGCACAACTTTGTCGATGAAACAAAAGCCTGCTATGGTGTTGATATGAGCACCTTGTCAAAGCCTTTTGCAGAGGAGCAGAGGAAATACTATCTACAGACATCAATGTGGAGCAATCTTCATCCACATCAAGTTATAGGAACTGCTGGTATAGTAAAGGAAATTGACTGTTTGACTACCACAGTGGCGGACATAGAGAAAGTCAGATCAAAATTTTCTCTATCAATAACTATGGAAAATACAAAATTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTCCGGGGACGAACTGAGGATCCAGCTGAACATGAGATTGAACTAACTACCGCACCTAGTGTAGATTACTGTACACACTGGGGCCAGCAGGTTTTCCTTTTAAATCCTCCTACACATGTGGGTGATGGTGATGAGTTAAGTGTTAATTTTCTCATGAGTCGGTCAAAGGAAAACCATCGTTTGATGGAGGTTGAGCTTGGGTGTGAGATTCAAAAGCGTTCGGGCAAGCTTGTTGCACCTTTCAAAAATAAGTACTACATTGAATGA 1122 0.4376 MGTSENAVSGGRGTTVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLENVVEVIEGSMEDITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKLDDYQSSMGDWHNFVDETKACYGVDMSTLSKPFAEEQRKYYLQTSMWSNLHPHQVIGTAGIVKEIDCLTTTVADIEKVRSKFSLSITMENTKLCGFGGWFDVHFRGRTEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVGDGDELSVNFLMSRSKENHRLMEVELGCEIQKRSGKLVAPFKNKYYIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01604 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Vivi4g01604 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 356 IPR029063 -
Vivi4g01604 373 Gene3D Vaccinia Virus protein VP39 19 164 IPR029063 -
Vivi4g01604 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Vivi4g01604 373 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Vivi4g01604 373 Gene3D - 166 373 - -
Vivi4g01604 373 CDD AdoMet_MTases 64 163 - -
Vivi4g01604 373 FunFam Protein arginine N-methyltransferase PRMT10 166 373 - -
Vivi4g01604 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 358 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01604 Vivi-Chr4 64846078 64851764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01604 24 334 C2H2 Transcription Factor Family AT3G12270 34.535 2.31e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01604 K11434 - gmx:100795134 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01604 4 64846078 64851764 Vivi4g01604 4 64846078 64851764 ECH